Gene Amir_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0023 
Symbol 
ID8324167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp25025 
End bp26491 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content70% 
IMG OID644940560 
ProductPeptidoglycan glycosyltransferase 
Protein accessionYP_003097843 
Protein GI256374183 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0951925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCC CGCTCCGCCG AGTCGGCGTC GCGATGATGG TCATGATGAT GATCCTGCTC 
GCGAACGCGA CGTACGTGCA GGTCATCAAG GCCGAGGAGT ACCGGACCAG CCCGTACAAC
GTCCGGGGCA GGCTGGAGAT GCTCTCCCGC GAGCGCGGCA GCATCATCGC CGCGGACGGG
ACGCCGCTGG CCACGGTCAC GCCGATCCCG GACAAGGACC GCTGGCAGCG GGTCTACGCC
AACGGGCCGA TGTACCTGCC GGTGACCGGC TACCTGTCCA ACACCTACGG CTCCAACGGG
CTGGAGCGGG CCGAGAACGA CCTGCTGATC GGCGAGGACG ACCGGCTGTT CACGCGCAGG
CTGTCCGACC TGATCACCGG CCGCGACCCC AAGGGCGCGA GCCTCCAGGT GACGATCAAC
CCGAAGGCTC AGCAGGCCGC GTACGAGGCG CTGGGCGACC GGACCGGCGC GGTCGTGGCG
ATCGAGCCGA AGACCGGCAA GATCCTGGCG CTGGTGAGCA CGCCCTCGTT CGACCCGAAC
AAGCTGGCCG TGCAGGACGG CCAGGAGGAG AAGGCGTACT GGGCCGAGGT CACGCAGGAC
AACCCGGCGC AGCCCGACGC CAACCGCGCC CTGTCCTGGA CCTACCCGCC CGGCTCGACG
TTCAAGCTGG TCGTGGCGGC GGCGGGCCTC GAAGAGGGCA TGGACAAGTC GACCCAGGTC
GACGCGCGGC CCACCATCAC GCTGCCGGGC ACGAACACCG AGCTGCCGAA CTTCAACGGC
ACCAACTGCA ACAACGGCGT CAACGCCACG CTGGAGCAGG CGATCGCCCA GTCGTGCAAC
ACCGCGTTCG CGAAGCTCGC GGGCGACCTC GGCACGGCGA AGCTGCGCGA GCAGGCCGCG
AAGTTCGGCA TCGACGACCA GAAGTACCAG GTCCCGATGA CCACGGCGGC CTCCACGCTC
GGCCCGGTCC CGGACCAGGC CGCGCTCTTC CAGACCGGCA TCGGCCAGCG CGACGTCCAG
GTGACGCCGC TGGCGAACGC GGTGATGGTC GCGACCATCG CGAACAAGGG CGTCCGCATG
AAGCCCTACC TGGTGGACAA GATCCTCGGC ACCGACACGG CGACCGTCGA CGAGACGAAG
CCGGACGAGG TCGACGAGGC CATCTCCGAG GACAGCGCCC AGCTGCTGAC CGAGATGATG
ATCGCCGCCG AGAACAAGGC CGGTGGCGCG GGCAAGCTCA GCAACATCCA GATCGCGTCG
AAGACCGGCA CCGCCGAGTG GGGCGTGGGC TCGACCCCGA ACCCGCACGC CTGGTACACC
GCGTTCGCCC CGGCGAACGA CCCGCAGATC GCGCTCGCGG TCATCGTCGA GAAGAGCGGC
GGCAAGCGGG ACGGCGCCGC GACGGGCAGC CTGGTGGCCG CGCCCGTCGG TCGCGCGGTG
ATCAGCAGCT ACCTCGGGAG CAGGTGA
 
Protein sequence
MNTPLRRVGV AMMVMMMILL ANATYVQVIK AEEYRTSPYN VRGRLEMLSR ERGSIIAADG 
TPLATVTPIP DKDRWQRVYA NGPMYLPVTG YLSNTYGSNG LERAENDLLI GEDDRLFTRR
LSDLITGRDP KGASLQVTIN PKAQQAAYEA LGDRTGAVVA IEPKTGKILA LVSTPSFDPN
KLAVQDGQEE KAYWAEVTQD NPAQPDANRA LSWTYPPGST FKLVVAAAGL EEGMDKSTQV
DARPTITLPG TNTELPNFNG TNCNNGVNAT LEQAIAQSCN TAFAKLAGDL GTAKLREQAA
KFGIDDQKYQ VPMTTAASTL GPVPDQAALF QTGIGQRDVQ VTPLANAVMV ATIANKGVRM
KPYLVDKILG TDTATVDETK PDEVDEAISE DSAQLLTEMM IAAENKAGGA GKLSNIQIAS
KTGTAEWGVG STPNPHAWYT AFAPANDPQI ALAVIVEKSG GKRDGAATGS LVAAPVGRAV
ISSYLGSR