| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0013 |
|---|
| Symbol | |
|---|
| ID | 8324157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 14769 |
|---|
| End bp | 15317 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644940550 |
|---|
| Product | Peptidylprolyl isomerase |
|---|
| Protein accession | YP_003097833 |
|---|
| Protein GI | 256374173 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGACA GCAACGAATC GCTCGTCGGG CGCAAGGTGA CGGCGACCCT GCACACCTCG
CAGGGCGTCA TCAAGATCAA CCTTTTCCCC GACCACGCCC CCAAGACGGT GGCGAACTTC
GTGGGCCTCG CAGAGGGCAC GAAGGCGTAC ACCGAAGCCA ACGCGAAGGG CGAGGCCAGC
GGGCCCTTCT ACGACGGTGC GATCTTCCAC CGGGTCATCG CAGGCTTCAT GCTGCAGGGC
GGTGACCCCA CGGGCACCGG TCGCGGCGGC CCCGGCTACA AGTTCGCCGA CGAGTTCCAC
CCGGAGCTCA AGTTCGACCG CCCCTACCTG CTCGCGATGG CGAACGCCGG GCCCAACACC
AACGGCTCCC AGTTCTTCAT CACGGTCGCG CCGACCTCGT GGCTGAACTT CAAGCACACG
ATCTTCGGCG AGGTCGCGGA CCAGGACTCC CGCAACGTCG TCGACGCGAT CGAGAACGGT
CCGACCGGTG CGGCCGACCG CCCGGTCAAG GACGTCGTCA TCGAGAAGGT CGCGATCGAG
AAGGTCTAG
|
|---|
| Protein sequence | MADSNESLVG RKVTATLHTS QGVIKINLFP DHAPKTVANF VGLAEGTKAY TEANAKGEAS
GPFYDGAIFH RVIAGFMLQG GDPTGTGRGG PGYKFADEFH PELKFDRPYL LAMANAGPNT
NGSQFFITVA PTSWLNFKHT IFGEVADQDS RNVVDAIENG PTGAADRPVK DVVIEKVAIE
KV
|
|---|
| |