| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0001 |
|---|
| Symbol | dnaA |
|---|
| ID | 8331322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 98 |
|---|
| End bp | 1831 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644940536 |
|---|
| Product | chromosomal replication initiation protein |
|---|
| Protein accession | YP_003097821 |
|---|
| Protein GI | 256374161 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0108959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGACC ACCAGGCCGA CTTGGGTCTC GTGTGGGAGC AGGTGGTGGA GGAGCTGGCG
AACAGCGCCC TCTCGTCCAG CACCTTGTCC CCGCAGCAGC GCGCGTGGAT GCGGGTGACC
CGACCGATCG GCCTGCTCGA CGGGACGGCC CTGCTCGCGG CGCCCAGCGA CTTCGCCAAG
GAGGCGATCG AGCGGGCCCT GCGCGAGCCC ATCACGGCCG CGCTGTCCCG CAGGCTCGGC
CGCGCGGTCT CGCTCGCGGT GAAGGTGGAC TCGCCGGAGC CGCCGATGGC GAGCGGCCCG
CCGACGACCC CGATCCCCGT GCCCATGCCG CCGGTCCCGC CGAGCGTCGC GCACGGCATC
ACCTTCGGCC AGCAGGTGCT CGGCCCGGTC GGCCCGAACG GCCAGACCTC GCTGCCCATA
GGCGGTCAGG CCGACGGCCC CGCAGGTCCG CCGCCCCCGG CCCCGACCGG TCTCCCGCTG
GAGCAGCCCG CGAACGCGCA GGCGCCCGCG GAGAGCCCGG AGTCGGACGC CGAGCCGGAG
GAGGGCGACG AGGAGCGCGA GACGCTCGCG ACCGTCAACG AGATCTGGCC GAAGTTCTCC
AGGGGCGCGG GCGGTCAGCC GACCCCGCCG AGCGGGACGC CGTTCACCCG GCCCGCGAAC
CCGGCGTCCT CGCAGACCCG GTTGAACGAG AAGTACAACT TCGACACCTT CGTCATCGGC
GCCTCGAACC GGTTCGCCCA CGCGGCGGCG GTCGCGGTGG CCGAGGCTCC CGCCAGGGCG
TACAACCCCT TGTTCATCTG GGGCGAGTCC GGTCTGGGGA AGACGCACCT GCTCCACGCG
GTCGGGCACT ACGCGCAGCG TTTGTTCCCC GGGATGCGGG TCCGCTACGT GTCGACCGAG
GAATTCACGA ACGACTTCAT CAACTCGCTG CGCGACGACC GGAAGGTCGC CTTCCAGCGC
CGCTACCGGG ACATCGACGT CCTCCTCGTG GACGACATCC AGTTCCTGGA GGGCAAGGAG
GGGACGCAGG AGGAGTTCTT CCACACCTTC AACACCCTCC ACAACTCGAA CAAGCAGATC
GTGGTGTCCT CGGACCGGCC GCCGAAACGG CTGGAGACCC TGGAGGACCG GCTGCGGACG
CGGTTCGAGT GGGGCCTCAT CACGGACATC CAGCCGCCCG AGCTGGAGAC GCGGATCGCG
ATCCTGCGGA AGAAGGCCGC GCAGGACCGG TTGGCGGCGC CCGCCGAGGT GCTGGAGTTC
ATCGCGGCCA GGGTGGTGCG GAACATCCGC GAGCTGGAGG GCGCGCTGAT CCGGGTCACG
GCGTTCGCGT CGCTGAACCG GCAGCCGGTC GACGTCCAGC TCGCCGAGAT AGTGCTGCGC
GACCTGATCC CGGACTCGCA CGTCCCGGAG ATCACCGCGC CCACCATCAT GGCGGTGACC
GCCGAGTTCT TCGAGGTCAC CATCGAGGAC CTGTGCGGCC CTGGCAAGAC CAAGGTGCTG
TCCACGGCCA GGCAGATCTC CATGTACCTG TGCCGCGAGC TGACGGACCT GTCGCTGCCG
AAGATCGGGC AGACGTTCGG CGGCCGGGAC CACACCACGG TCATGTACGC GGACAAGAAG
ATCCGCAAGG AGATGGCCGA GCGCAGGCGC ATCTACGACC AGGTCCAGGA GCTCACCTCG
CGCATCAAGC AGCGCTCGCG CTACCTGGTG GCCCCCCCGG TCGATCCGAC CTGA
|
|---|
| Protein sequence | MSDHQADLGL VWEQVVEELA NSALSSSTLS PQQRAWMRVT RPIGLLDGTA LLAAPSDFAK
EAIERALREP ITAALSRRLG RAVSLAVKVD SPEPPMASGP PTTPIPVPMP PVPPSVAHGI
TFGQQVLGPV GPNGQTSLPI GGQADGPAGP PPPAPTGLPL EQPANAQAPA ESPESDAEPE
EGDEERETLA TVNEIWPKFS RGAGGQPTPP SGTPFTRPAN PASSQTRLNE KYNFDTFVIG
ASNRFAHAAA VAVAEAPARA YNPLFIWGES GLGKTHLLHA VGHYAQRLFP GMRVRYVSTE
EFTNDFINSL RDDRKVAFQR RYRDIDVLLV DDIQFLEGKE GTQEEFFHTF NTLHNSNKQI
VVSSDRPPKR LETLEDRLRT RFEWGLITDI QPPELETRIA ILRKKAAQDR LAAPAEVLEF
IAARVVRNIR ELEGALIRVT AFASLNRQPV DVQLAEIVLR DLIPDSHVPE ITAPTIMAVT
AEFFEVTIED LCGPGKTKVL STARQISMYL CRELTDLSLP KIGQTFGGRD HTTVMYADKK
IRKEMAERRR IYDQVQELTS RIKQRSRYLV APPVDPT
|
|---|
| |