Gene Phep_4266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4266 
Symbol 
ID8255402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5144020 
End bp5144652 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content40% 
IMG OID644937932 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003094519 
Protein GI255534147 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATAG TAGGTAAAAA ATTCCCGAGT GTTAGCATTG ATGCGATGTC TGAAATGGGC 
GATGATCTGA AGATCAATGT ATTTGAAGAA GCAGTTAGTA AAGAAAAAAA AGTATTGTTA
TTCTGGTATC CAAAAGATTT CACTTTTGTT TGTCCAACTG AACTGCATGC TTTTCAAGCG
GCCTTACCTG ATTTTGAAAA AAGAAATACC ATTGTAATTG GTGCTTCTTG CGATACCAAT
GAAGTTCATT TTGCCTGGTT AAATACCGCA AAGGACAACG GTGGTATTGA AGGTGTAACT
TACCCGATCC TGGCGGATAC ACACAGGCAT CTGGCCAATA TTTTAGGAAT TGTTGATCAG
GAAGTGGAGT ATGATGAAGA AGGAAACGAA TCTTTCAGTG GTTCAAATGT TACTTTCAGG
GCTACTTACC TGATTGATGA GACGGGTAAA GTGTTCCACG AAAGTGTAAA CGATATGCCT
GTTGGCAGAA ATGTAAAAGA ATACCTGCGT TTAATAGATG CTTATGCCCA TGTACAGAAA
CATGGTGAAG TATGCCCTGC AAACTGGGAA GAAGGTAAGG AAGCGATGAG TGCGAACAGG
ACCGGCGTTG CAGAATATCT GAGCGCTAAT TAA
 
Protein sequence
MAIVGKKFPS VSIDAMSEMG DDLKINVFEE AVSKEKKVLL FWYPKDFTFV CPTELHAFQA 
ALPDFEKRNT IVIGASCDTN EVHFAWLNTA KDNGGIEGVT YPILADTHRH LANILGIVDQ
EVEYDEEGNE SFSGSNVTFR ATYLIDETGK VFHESVNDMP VGRNVKEYLR LIDAYAHVQK
HGEVCPANWE EGKEAMSANR TGVAEYLSAN