| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4260 |
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| Symbol | |
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| ID | 8255396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 5136662 |
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| End bp | 5137978 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937926 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003094513 |
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| Protein GI | 255534141 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACATA AATCAATCAG ATTAAGCTTC TTAACATTTA TTATCCCGGG AATCCTCTAC
GCCCAGGACA TAAAAAAATT AAGCTTGCAG GAGGCTATCG CCCTTGGGAT AGAGAACAGC
AAAAATCTAA AACTATCGCA AAATAAAGTA GAGCAGGCCA TTGCGCAGTT AAACATGGTT
AAAGACAATG CTTTACCAAG CGCAAAGGCA TCGTTTTTGT ACAACCATGC CGAAATCCCC
ACCAACACCT TAAGCATTGG CGGCGGCAAC CCGATCCATC TGCCCAAGCG CGCAGATGCC
TTTATCGGTA CTGCTGCTGT TGAAGAGCTG GTTTATGGCG GCGGAAAATT GAAATATGCC
GAAGAATCTA CCCGGCTGCT TTCCGATGTG GCGCGCCTGG ATGCGGATAA AAACAAAGAA
GAGATCAGCT ACGCTGTCAT CAACACCTAT TATTCCTTGT TTAAAGTGAT GCAAAGCAAA
AAAGTTATCG CACAAAACCT GGAGTCTATC GACAGTCAGC TTAAACAGGC GCAGCGCTTT
TTTGAACAGG GAATTGTAAC CAAAAATGAT GTATTGAGGT TCCAGCTGCA ACAGGCAAAT
ATCTCGCTAA CCGATATGGA GGCAGAAAAC AACCGCAAGA TCATTAACTA CAACCTGGAT
ATTTTACTCG GATTAAACGA AAATACGCAG ATCGAAATTG CCGATCCGGA TGCCGCAGCA
AAAGCCATCG GACCTTTAAG CAGTTACATC GACCTCGCCC TGGGCAGCAG ACAGGAACTC
AGACAGCTGG ACCTTCAAAA CAAGGTGGCC GATGTCAATA TCAAGTCGGT AAAAGCCAAT
ACCCTTCCTA CTGTTGGGGT AGGCGCTAAC CTCTATTACA TTAACCCGAG TGGCAAATTT
GTACCGCCAA CAGACCAGTA CATTATGCCG GTAACCCTGG GGGCCAACAT CTCCTGGAAT
ATTGGTAACC TGTGGACCAA CAAACACAAG GTAACCGATG CCAGAATTCA GCAAAAAGAG
GTAGAGCTAC AAAAAGACAT CCTTTCTGAC CAGGTTAAAA CGGAGATCAA CAGCAATTAC
CAGCGCTACC AGCTGGCCCT AAATAAGATC AGGGTACTGG AAACATCCAT TGCCCAGGCT
ACAGAAAACG ACAAATTGCT GGCCTCAAAA TATAAAAACA ATGTCGCTTC GGCAATAGAC
AGGATTGATG CCGAAACCCT GCTTTATCAG GCTAAAATTA ACCTCGAACT GGCTAAAGCC
GATGCAGGTC TGGCTTATTA TACTTTACTA AAATCTACCG GAAAAATTTC TCAATAA
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| Protein sequence | MIHKSIRLSF LTFIIPGILY AQDIKKLSLQ EAIALGIENS KNLKLSQNKV EQAIAQLNMV
KDNALPSAKA SFLYNHAEIP TNTLSIGGGN PIHLPKRADA FIGTAAVEEL VYGGGKLKYA
EESTRLLSDV ARLDADKNKE EISYAVINTY YSLFKVMQSK KVIAQNLESI DSQLKQAQRF
FEQGIVTKND VLRFQLQQAN ISLTDMEAEN NRKIINYNLD ILLGLNENTQ IEIADPDAAA
KAIGPLSSYI DLALGSRQEL RQLDLQNKVA DVNIKSVKAN TLPTVGVGAN LYYINPSGKF
VPPTDQYIMP VTLGANISWN IGNLWTNKHK VTDARIQQKE VELQKDILSD QVKTEINSNY
QRYQLALNKI RVLETSIAQA TENDKLLASK YKNNVASAID RIDAETLLYQ AKINLELAKA
DAGLAYYTLL KSTGKISQ
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