| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4214 |
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| Symbol | |
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| ID | 8255350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5092527 |
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| End bp | 5095346 |
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| Gene Length | 2820 bp |
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| Protein Length | 939 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937880 |
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| Product | DNA polymerase I |
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| Protein accession | YP_003094467 |
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| Protein GI | 255534095 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.305733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TTTTTCTTCT TGACGGTATG GCGCTGATTT ACAGGGCGCA TTTTGCACTG
AGTAAAAACC CAAGATTTAC TTCAACAGGT ATCAATACTT CGGCAGTAAT GGGCTTTGCC
AATACTTTGA TGGAAGTGTT AAAAAAAGAA AACCCCACAC ATATAGCTGT AGTTTTTGAT
ACGGATGCCC CAACTGAAAG GCATACCGAT TTTGAGGCGT ATAAAGCCCA TCGTGAGGCC
ATGCCGGAAG ACCTTTCTGC AGCGCTTCCC TATATTTTTA AACTGATCGA AGGATTCAGG
ATCCCGGTGA TCACAAAAGA CGGTTTTGAG GCAGATGATA TTATTGGAAC TTTGGCCAAA
GAAGCAGAAA AAAAAGGTTT CCAGGTATTT TGCATGACCC CGGATAAGGA TTTTGCACAA
TTGGTATCGG ACAATATTTT TATTTATAAG CCCGCACGTA TGGGCAATGA AATGGAAATA
ATGGGGGTGA AAGAAGTGCT GGCCAAATGG GAAATTGAAC GTGTTGAACA AGTCATTGAT
ATCCTCGGAC TATGGGGTGA TGCGGTAGAT AATATTCCGG GCATACCTGG CATAGGAGAA
AAAACGGCAA AAGCACTCAT TAAACAATAT GGTTCGGTAG AAAATATCAT TGCCAATTCG
CATGAATTAA AAGGCAAACA GCGTGAGAAT GTGGAAACTT ATGCTGAACA GGGCCTGATC
TCTAAAAAAC TGGCCACCAT TATACTCAAT GTTCCGGTAG AATTTGATGA GAAGGCCCTT
GAATTGGAAG AGCCAAGCCG GGAATTGCTG GAACCTTTAT TTGCTGAGCT GGAATTCAGG
ACCATAGGTA AAAGGGTATT TGGAGAGGGC TTTAACAGAG GGGCAACAAT GGTGGTTTCG
CAGCAAACCG ATCTTTTTGG AAATGTGGTT AGTGAAACCA TCAGCTATGT AGAAACGGTT
GTACAAACTG TACCCGAGAC TACAGAGCTG GAGGAAACAA AGCCACTGAA TACCATAGAA
AATACAAGCC ACAATTACCA GCTTGCCAAT ACCCCGGAAC TGCGCAGGGA ACTGGTTGAT
TTGCTGCTGA AGCAGGAAAG CATTTCTTTT GACACCGAAA CAACGGGTAC GGATGCAAAC
CTGGCAGAAC TGGTAGGGCT GTCTTTCAGC ATTAAGCCCG GTGAGGGTTA TTATATCCCT
GTACCTGCCG AAATGGAAGC TGCGCAACAG ATTGTAGAGG AATTCAGACC GGTACTGGAG
AATGAAAATA TTGTTAAAAT AGGACAGAAC ATTAAATATG ATATGCTGAT CCTGAAATGG
TATGGCATAT CGGTAAAGGG GCGGTTGTTT GATACCATGC TGGCCCATTA CCTGATTGAT
CCGGATACCC GTCACAACAT GGATGTGCTG TCGGAGAATT ATTTAAATTA TTCGCCCATC
TCCATCACCA CACTGATTGG CCCTAAAGGT AAATCGCAGG GTACTATGCG TGATGTGCCT
GTTGAAAAGG TAGTGGATTA TGCAGCAGAA GATGCGGATA TTACCTTACA GCTGGCCAAT
GTTTTTGAGC CCCTGTTGAA GCAGTTAAAT GCTGAAAAGC TGGCTACAGA AGTAGAAAAC
CCCTTGATTT ATGTATTGGC AGATATTGAA AAGGAAGGGG TGAGGATTGA TATGGATACC
CTGATCAATT ATTCAAAAGA GCTGGAGCTG GATATCAGGA AGTTTGAACA AAGTGTATAT
GATAAATGTG GCATCAAGTT TAACCTGGCC TCGCCAAAAC AATTGGGGGA AGTGCTTTTT
GATAAGTTAC AGCTTGACCC TAAAGCAAAA AAGACTAAAA CAGGGCAATA CCAGACCGGT
GAAGATGTGT TGCTGGCCCT GGCACATAAA AGTGATATTG TCCAGGATAT TTTAGATTTC
CGTCAGCTGC AAAAGTTAAA ATCTACTTAC GTAGATGCAC TGCCATTGCT GGTTAACCCT
AAAACGGGGC GTGTACATAC CAGTTTTAAC CAGGCGGTAG CTGCAACAGG AAGGTTGAGC
TCCAACAATC CAAACCTGCA AAATATCCCG ATCCGTACAG AACGGGGCAG GGAAGTACGT
AAGGCATTTA TTCCCAGAGA TGAAAACCAT ATTTTGCTTT CTGCGGATTA TTCGCAGATA
GAGCTGCGGA TTATAGCCGA CATCAGCAAG GAAGAAAATA TGCTGGATGC TTTTAAGAAT
GGAATTGATA TTCATACGGC TACTGCAGCC AGGGTTTACG GGATTGCTAT TGAGGAGGTA
ACACCTACAC AGCGCCGGAA TGCCAAAGCG GTAAATTTTG GGATCATTTA TGGTCAGTCG
GCTTTTGGCT TGTCGCAAAA TCTGGGTATT CCACGTAAGG AAGCTGCAGA AATCATAGAA
CAGTATTTTA CGCAGTACCC TGGAATTAAA AGGTACATGT CGGACACCAT GAACTTTGCC
CGTGAGAATG GTTTTGTAGA AACCATTCTG GGCAGGAGAA GGTATTTGCG CGACATCAAT
TCTGCCAACC AGACTGTACG TGGTTTTGCC GAGCGAAACG CGATAAATGC CCCGATCCAG
GGATCAGCTG CAGATATGAT CAAAGTGGCG ATGATCAATA TCCACAAGGA CATTCAGGAT
CAGGGCCTGC AATCTAAAAT GACGATGCAG GTGCATGATG AGTTGGTGTT TGATGTGCTG
AAATCAGAAG TTGAGGCCAT GAAGAAGATC ATTGCCCATC GGATGAAAAC AGCGATCAAA
ACGACAGTAC CCATTGAAGT AGAGATTGGT GAAGGCGAAA ACTGGCTCGC TGCACATTAA
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| Protein sequence | MKKLFLLDGM ALIYRAHFAL SKNPRFTSTG INTSAVMGFA NTLMEVLKKE NPTHIAVVFD
TDAPTERHTD FEAYKAHREA MPEDLSAALP YIFKLIEGFR IPVITKDGFE ADDIIGTLAK
EAEKKGFQVF CMTPDKDFAQ LVSDNIFIYK PARMGNEMEI MGVKEVLAKW EIERVEQVID
ILGLWGDAVD NIPGIPGIGE KTAKALIKQY GSVENIIANS HELKGKQREN VETYAEQGLI
SKKLATIILN VPVEFDEKAL ELEEPSRELL EPLFAELEFR TIGKRVFGEG FNRGATMVVS
QQTDLFGNVV SETISYVETV VQTVPETTEL EETKPLNTIE NTSHNYQLAN TPELRRELVD
LLLKQESISF DTETTGTDAN LAELVGLSFS IKPGEGYYIP VPAEMEAAQQ IVEEFRPVLE
NENIVKIGQN IKYDMLILKW YGISVKGRLF DTMLAHYLID PDTRHNMDVL SENYLNYSPI
SITTLIGPKG KSQGTMRDVP VEKVVDYAAE DADITLQLAN VFEPLLKQLN AEKLATEVEN
PLIYVLADIE KEGVRIDMDT LINYSKELEL DIRKFEQSVY DKCGIKFNLA SPKQLGEVLF
DKLQLDPKAK KTKTGQYQTG EDVLLALAHK SDIVQDILDF RQLQKLKSTY VDALPLLVNP
KTGRVHTSFN QAVAATGRLS SNNPNLQNIP IRTERGREVR KAFIPRDENH ILLSADYSQI
ELRIIADISK EENMLDAFKN GIDIHTATAA RVYGIAIEEV TPTQRRNAKA VNFGIIYGQS
AFGLSQNLGI PRKEAAEIIE QYFTQYPGIK RYMSDTMNFA RENGFVETIL GRRRYLRDIN
SANQTVRGFA ERNAINAPIQ GSAADMIKVA MINIHKDIQD QGLQSKMTMQ VHDELVFDVL
KSEVEAMKKI IAHRMKTAIK TTVPIEVEIG EGENWLAAH
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