Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4187 |
Symbol | |
ID | 8255322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 5066163 |
End bp | 5067653 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644937852 |
Product | glycerol kinase |
Protein accession | YP_003094440 |
Protein GI | 255534068 |
COG category | [C] Energy production and conversion |
COG ID | [COG0554] Glycerol kinase |
TIGRFAM ID | [TIGR01311] glycerol kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.324248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGT TTATTTTATC CTTTGATCAG GGAACCACAA GTTCAAGGGC AATTGTATTT AATAAGGAAG GAAGTATTGT ATCAATCGCC CAAAAGGAGT TTGAACAGAT CTATCCTCAA CCTGGATGGG TAGAGCATAA TGCCAGCGAA ATCTGGTCTA CCCAGATTGC AGTAGCTACC GAAGCGATTG TAAAAGCCAG CCTTACCCCA CCCGACATTG CTGCTATCGG CATCACCAAC CAGCGTGAAA CAACGGTACT TTGGGATAAA AAAACCGGAG AGCCTTTATA CAACGCCATA GTATGGCAAG ACAGGCGTAC ATCTGCCTAT TGTGATGAAC TGAAGTCCAA AGGACTGGCG AAAAAAATAC AGGAAAAAAC AGGGCTGATA CTGGATGCCT ACTTTTCGGC CACCAAGATC AAATGGATAC TTGATAACGT AGAAGGAGCC AGGGCCAAAG CTGAAGCTGG TGATATTGCT TTTGGCACCA TAGATTCATG GCTGATCTGG AAACTTACAG ATGGCAGGGT ACATGTTACA GATGTAAGCA ATGCTTCCAG GACCATGATC TATAACATCC ATACCCTGGA TTGGGACCAG GAACTGCTTG ATCTTTTTGA CATCCCTAAA AATATACTCC CTGAAGTCAA ATCATCAAGT GAAGTTTACG GGGAGACCAC AGGAAATGTA CTTGCCGCAA AAATTCCTAT TGCCGGCATT GCCGGTGATC AGCAGGCCGC CCTGTTCGGA CAAATGTGTA CTGAAGTAGG AATGGTTAAA AATACTTATG GAACAGGTTG CTTTATGCTC ATGAACATCG GCGATAAACC CATTGTTTCG CAAAACAACC TGGTAACCAC CATAGCCTGG AAAATAAATG GCAAAGTACA GTATGCTTTA GAGGGAAGTA TTTTTATTGG CGGGGCAGTT GTACAATGGC TAAGGGATGG GCTGGGCATC ATCAGCTCTT CGGCCGAAGT AGAAACCCTT GCATTAAAGG TAGCGGATAC AGGTGGTGTT TACCTGGTAC CTGCATTTGC CGGTCTGGGT GCACCACACT GGAACCAGGA TGCCCGCGGA ACCATAACCG GTATCACCCG TGGAACTACT GCTGCACACC TTGCCAGAGC AGCAATCGAA AGTATTGCTT TTCAGACCAT GGAAGTGCTT AAAGCTATGG AAGCTGATTC AGGACATGCC ATTAAAGAAT TACGTGTGGA TGGCGGGGCA ACCAGCAACG ACATATTGAT GCAGTTCCAG GCCGATTTGC TGGATACCAC AGTAATCCGT CCGAAAGTAA CGGAAGTAAC CGCTTTGGGG GCTGCTTATT TGGCCGGACT GGCTGTAGGC TACTGGAACA GCATGGATGA CATTAGCGGA CAATGGAAAA TTGACAAGAA TTTTAATGCA GGCAATACCG ATAACATTGC TGAACGTATA AAAGGCTGGA ACAGGGCAGT AAAAGCCGCA AAAGCCAATG CCGAGAATTA A
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Protein sequence | MSKFILSFDQ GTTSSRAIVF NKEGSIVSIA QKEFEQIYPQ PGWVEHNASE IWSTQIAVAT EAIVKASLTP PDIAAIGITN QRETTVLWDK KTGEPLYNAI VWQDRRTSAY CDELKSKGLA KKIQEKTGLI LDAYFSATKI KWILDNVEGA RAKAEAGDIA FGTIDSWLIW KLTDGRVHVT DVSNASRTMI YNIHTLDWDQ ELLDLFDIPK NILPEVKSSS EVYGETTGNV LAAKIPIAGI AGDQQAALFG QMCTEVGMVK NTYGTGCFML MNIGDKPIVS QNNLVTTIAW KINGKVQYAL EGSIFIGGAV VQWLRDGLGI ISSSAEVETL ALKVADTGGV YLVPAFAGLG APHWNQDARG TITGITRGTT AAHLARAAIE SIAFQTMEVL KAMEADSGHA IKELRVDGGA TSNDILMQFQ ADLLDTTVIR PKVTEVTALG AAYLAGLAVG YWNSMDDISG QWKIDKNFNA GNTDNIAERI KGWNRAVKAA KANAEN
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