Gene Phep_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4187 
Symbol 
ID8255322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5066163 
End bp5067653 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content46% 
IMG OID644937852 
Productglycerol kinase 
Protein accessionYP_003094440 
Protein GI255534068 
COG category[C] Energy production and conversion 
COG ID[COG0554] Glycerol kinase 
TIGRFAM ID[TIGR01311] glycerol kinase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.324248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGT TTATTTTATC CTTTGATCAG GGAACCACAA GTTCAAGGGC AATTGTATTT 
AATAAGGAAG GAAGTATTGT ATCAATCGCC CAAAAGGAGT TTGAACAGAT CTATCCTCAA
CCTGGATGGG TAGAGCATAA TGCCAGCGAA ATCTGGTCTA CCCAGATTGC AGTAGCTACC
GAAGCGATTG TAAAAGCCAG CCTTACCCCA CCCGACATTG CTGCTATCGG CATCACCAAC
CAGCGTGAAA CAACGGTACT TTGGGATAAA AAAACCGGAG AGCCTTTATA CAACGCCATA
GTATGGCAAG ACAGGCGTAC ATCTGCCTAT TGTGATGAAC TGAAGTCCAA AGGACTGGCG
AAAAAAATAC AGGAAAAAAC AGGGCTGATA CTGGATGCCT ACTTTTCGGC CACCAAGATC
AAATGGATAC TTGATAACGT AGAAGGAGCC AGGGCCAAAG CTGAAGCTGG TGATATTGCT
TTTGGCACCA TAGATTCATG GCTGATCTGG AAACTTACAG ATGGCAGGGT ACATGTTACA
GATGTAAGCA ATGCTTCCAG GACCATGATC TATAACATCC ATACCCTGGA TTGGGACCAG
GAACTGCTTG ATCTTTTTGA CATCCCTAAA AATATACTCC CTGAAGTCAA ATCATCAAGT
GAAGTTTACG GGGAGACCAC AGGAAATGTA CTTGCCGCAA AAATTCCTAT TGCCGGCATT
GCCGGTGATC AGCAGGCCGC CCTGTTCGGA CAAATGTGTA CTGAAGTAGG AATGGTTAAA
AATACTTATG GAACAGGTTG CTTTATGCTC ATGAACATCG GCGATAAACC CATTGTTTCG
CAAAACAACC TGGTAACCAC CATAGCCTGG AAAATAAATG GCAAAGTACA GTATGCTTTA
GAGGGAAGTA TTTTTATTGG CGGGGCAGTT GTACAATGGC TAAGGGATGG GCTGGGCATC
ATCAGCTCTT CGGCCGAAGT AGAAACCCTT GCATTAAAGG TAGCGGATAC AGGTGGTGTT
TACCTGGTAC CTGCATTTGC CGGTCTGGGT GCACCACACT GGAACCAGGA TGCCCGCGGA
ACCATAACCG GTATCACCCG TGGAACTACT GCTGCACACC TTGCCAGAGC AGCAATCGAA
AGTATTGCTT TTCAGACCAT GGAAGTGCTT AAAGCTATGG AAGCTGATTC AGGACATGCC
ATTAAAGAAT TACGTGTGGA TGGCGGGGCA ACCAGCAACG ACATATTGAT GCAGTTCCAG
GCCGATTTGC TGGATACCAC AGTAATCCGT CCGAAAGTAA CGGAAGTAAC CGCTTTGGGG
GCTGCTTATT TGGCCGGACT GGCTGTAGGC TACTGGAACA GCATGGATGA CATTAGCGGA
CAATGGAAAA TTGACAAGAA TTTTAATGCA GGCAATACCG ATAACATTGC TGAACGTATA
AAAGGCTGGA ACAGGGCAGT AAAAGCCGCA AAAGCCAATG CCGAGAATTA A
 
Protein sequence
MSKFILSFDQ GTTSSRAIVF NKEGSIVSIA QKEFEQIYPQ PGWVEHNASE IWSTQIAVAT 
EAIVKASLTP PDIAAIGITN QRETTVLWDK KTGEPLYNAI VWQDRRTSAY CDELKSKGLA
KKIQEKTGLI LDAYFSATKI KWILDNVEGA RAKAEAGDIA FGTIDSWLIW KLTDGRVHVT
DVSNASRTMI YNIHTLDWDQ ELLDLFDIPK NILPEVKSSS EVYGETTGNV LAAKIPIAGI
AGDQQAALFG QMCTEVGMVK NTYGTGCFML MNIGDKPIVS QNNLVTTIAW KINGKVQYAL
EGSIFIGGAV VQWLRDGLGI ISSSAEVETL ALKVADTGGV YLVPAFAGLG APHWNQDARG
TITGITRGTT AAHLARAAIE SIAFQTMEVL KAMEADSGHA IKELRVDGGA TSNDILMQFQ
ADLLDTTVIR PKVTEVTALG AAYLAGLAVG YWNSMDDISG QWKIDKNFNA GNTDNIAERI
KGWNRAVKAA KANAEN