Gene Phep_4166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4166 
Symbol 
ID8255301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5039549 
End bp5039932 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content43% 
IMG OID644937831 
Productribosome-binding factor A 
Protein accessionYP_003094419 
Protein GI255534047 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0858] Ribosome-binding factor A 
TIGRFAM ID[TIGR00082] ribosome-binding factor A 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000106795 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000804111 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAGTA AACGTCAACA GAAATTTGCC GGTGTAATAC AAGAAGAGTT AGCTGCTATT 
TTTCAACGTG AAGGATCAGC TTATTTACCG AATACACTGG TTACCATTAC TAAAGTTCGT
GTTTCTCCGG ATCTGGCGGT AGCAAAAGTT TATCTAAGCT TTTTAAATAC CAGCAATACC
ACCCTTTCTG TTGCCGAGGT AAATTCTCAT TCCGGCGAAA TCAGGTATAA GCTGGGCGCC
CGCATCCGCC ATCAGGCCAG GGTGGTTCCA ACACTTACTT TTTTTGTGGA TGATACCAAT
ACGTATGTGG AACAGATGGA CAAGTTGTTT GACAAGATTT CGAGAGACCG CGAAGAAAGC
GGAGCGCGTG AAGAAAGCGA ATAA
 
Protein sequence
MESKRQQKFA GVIQEELAAI FQREGSAYLP NTLVTITKVR VSPDLAVAKV YLSFLNTSNT 
TLSVAEVNSH SGEIRYKLGA RIRHQARVVP TLTFFVDDTN TYVEQMDKLF DKISRDREES
GAREESE