Gene Phep_4149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4149 
Symbol 
ID8255284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand- 
Start bp5023581 
End bp5024213 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content41% 
IMG OID644937814 
ProductGTP cyclohydrolase I 
Protein accessionYP_003094402 
Protein GI255534030 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0266568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATC ATACAAATCA TTTAGATGAG GAAGATAATG GCTATATAAA AATAGACCGT 
TATAACGAAG GCAAAATCGC TGCAGTTGCA CATCATTATA AAGACATCCT TGGCCAGCTG 
GGGGAAGATC CAAACCGTGA AGGTTTAATA AAAACGCCTG AACGCGTAGC TAAGGCCTTA 
CAATATTTAA CACATGGTTA TGACCTTAAC CCTGCAGAGA TATTGCGTTC AGCAATGTTT 
AAAGAAGATT ACAGCCAGAT GGTTGTGGTA AAGGATATAG AAGTTTTCTC TATGTGCGAA 
CACCATATGC TCCCGTTTTT TGGTAAGGCC CATATTGCTT ATATACCAAA TGGGCACATT 
GTAGGCTTAA GTAAAATTCC GCGTATAGTT GATGCCTTTG CAAGAAGACT GCAGGTACAG 
GAGCGGCTTA CCAATGAGAT CAGAGATTGT ATCCAGGATA CGTTAATGCC AGCAGGCGTT 
GCAGTGGTGA TAGAATGCAA GCACTTATGC ATGGCAATGA GGGGCATACA AAAACAAAAC 
TCAGTTACCA CCACTTCGGC ATTTACAGGG GAATTTGCAA AGGACAAAAC AAGGGCAGAG 
TTTTTAAGAT TGATCACAGC CAATCTTCAC TAA
 
Protein sequence
MDNHTNHLDE EDNGYIKIDR YNEGKIAAVA HHYKDILGQL GEDPNREGLI KTPERVAKAL 
QYLTHGYDLN PAEILRSAMF KEDYSQMVVV KDIEVFSMCE HHMLPFFGKA HIAYIPNGHI 
VGLSKIPRIV DAFARRLQVQ ERLTNEIRDC IQDTLMPAGV AVVIECKHLC MAMRGIQKQN 
SVTTTSAFTG EFAKDKTRAE FLRLITANLH