Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4117 |
Symbol | |
ID | 8255252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4974554 |
End bp | 4975627 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644937782 |
Product | peptide chain release factor 1 |
Protein accession | YP_003094370 |
Protein GI | 255533998 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGAGA AATTAGAAGC AATTAAACTG CGTTGGGAAG ATGTGGAAGA GCAGTTGAGT AATCCTGATA CCATGCAGGA TATGAAGCGC TTTGCTGCTT TGAATAAAGA ATATAAAGAC CTCGGCAAGA TTGTAGATGA ATATAAGGTC TACAAAAATG TGATGAGCAA TATAGAAGCC AACAAAGAAA TCCTGAGCAC AGAAAAGGAT GCTGAAATGC GTGAAATGGC AAAAGAGGAG TTAGATCTGT TATTGGTACA GCAGGAAGAG CTGGAAGAAA AGGTGCGGTT AATGCTCATT CCTGTTGATC CGGAAGATGC TAAAAATGCG GTCTTTGAAA TCAGAGGGGG TACAGGTGGA GATGAAGCTG CGCTGTTCGC CGGAGATCTG TACCGGATGT ATAGCCGCTT CTTTGAGCAA AAAGGCTGGA AAGTGGAAAC TGTTGATGTA ACAGAAGGTA CGGCCGGCGG TTATAAAGAG GTAATTTTAA AAGTTAGTGG TGAAGATGTT TACGGACAGC TGAAATATGA ATCTGGTGTC CACCGGGTGC AGCGTGTACC AGATACGGAA ACTCAGGGAC GCGTACATAC TTCAGCGGCT TCTGTAGCCG TATTGCCGGA AGCAGAAGAG ATCGATCTTT ACATTAATCC GGCAGATATT GATCTGCAAA CATCTCGTTC CGGTGGTGCA GGCGGTCAGA ATGTGAACAA AGTAGAAACC AAAGTGCAGT TGACACACAG GCCATCTGGT ATTGTGGTGG TTTGCCAGCA GGAAAGGTCT CAGTTAGGCA ACCGCGTAAT TGCGATGGAG ATGTTGCGCA GTAAGCTTTA TGACATCGAA TTGCAGAAGA AAAATGGGGA TATCGCTGCA AGACGGAAAA CGATGGTCTC AACAGGGGAC CGTTCTGCAA AGATCCGTAC TTACAACTAT CCGCAAGGTA GGGTTACCGA TCACCGTATC GGATTGACGC TTTATAACCT GAACAGCATC ATGGATGGTG GTGTACAGGA GCTTATTGAT GCCTTGCAGT TTGCAGAAAA TGCAGAGAAA TTAAAAGAAG GAGCTGTAAT TTAG
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Protein sequence | MLEKLEAIKL RWEDVEEQLS NPDTMQDMKR FAALNKEYKD LGKIVDEYKV YKNVMSNIEA NKEILSTEKD AEMREMAKEE LDLLLVQQEE LEEKVRLMLI PVDPEDAKNA VFEIRGGTGG DEAALFAGDL YRMYSRFFEQ KGWKVETVDV TEGTAGGYKE VILKVSGEDV YGQLKYESGV HRVQRVPDTE TQGRVHTSAA SVAVLPEAEE IDLYINPADI DLQTSRSGGA GGQNVNKVET KVQLTHRPSG IVVVCQQERS QLGNRVIAME MLRSKLYDIE LQKKNGDIAA RRKTMVSTGD RSAKIRTYNY PQGRVTDHRI GLTLYNLNSI MDGGVQELID ALQFAENAEK LKEGAVI
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