Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4081 |
Symbol | |
ID | 8255215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4923005 |
End bp | 4923547 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644937745 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_003094334 |
Protein GI | 255533962 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.343571 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACA TCAATATAGT AGAAGCGCCG CCAGGCATCG AAGGTTCTGG CTTTTTTGCC ACCTCTTTAG ATAAAGTTAT TGGTTTGGCC CGCTCACATT CCTTATGGCC TTTGCCCTTT GCTACCTCAT GTTGCGGTAT AGAGTTTATG GCAACAATGG GTTCCCATTA TGATTTTGGC CGTTTTGGTT CTGAGCGCCT GAGCTTTTCT CCGCGTCAGG CCGATTTGCT GATGGTAATG GGTACGATCG CCAAGAAAAT GAGCCCCGTT TTGAAACAGG TTTATCTGCA AATGGCCGAG CCCCGTTGGG TGATGGCTGT AGGTGCCTGT GCATCGAGCG GTGGTATATT TGATACCTAT TCGGTTTTAC AGGGGATTGA TGAAATCATC CCTGTGGATG TGTATGTGCC AGGTTGTCCG CCAAGGCCGG AAGCAATTCT GGATGGTTTT GGAAAGATAC AGGAGCTGGT GAGAAACGAG TCGTCAAGAA GAAGGAACTC TGAGCAGTAC AAGGAAATGT TGGCTTCATA CGGAATACTA TAA
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Protein sequence | MSDINIVEAP PGIEGSGFFA TSLDKVIGLA RSHSLWPLPF ATSCCGIEFM ATMGSHYDFG RFGSERLSFS PRQADLLMVM GTIAKKMSPV LKQVYLQMAE PRWVMAVGAC ASSGGIFDTY SVLQGIDEII PVDVYVPGCP PRPEAILDGF GKIQELVRNE SSRRRNSEQY KEMLASYGIL
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