Gene Phep_4081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4081 
Symbol 
ID8255215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4923005 
End bp4923547 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content48% 
IMG OID644937745 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_003094334 
Protein GI255533962 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.343571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA TCAATATAGT AGAAGCGCCG CCAGGCATCG AAGGTTCTGG CTTTTTTGCC 
ACCTCTTTAG ATAAAGTTAT TGGTTTGGCC CGCTCACATT CCTTATGGCC TTTGCCCTTT
GCTACCTCAT GTTGCGGTAT AGAGTTTATG GCAACAATGG GTTCCCATTA TGATTTTGGC
CGTTTTGGTT CTGAGCGCCT GAGCTTTTCT CCGCGTCAGG CCGATTTGCT GATGGTAATG
GGTACGATCG CCAAGAAAAT GAGCCCCGTT TTGAAACAGG TTTATCTGCA AATGGCCGAG
CCCCGTTGGG TGATGGCTGT AGGTGCCTGT GCATCGAGCG GTGGTATATT TGATACCTAT
TCGGTTTTAC AGGGGATTGA TGAAATCATC CCTGTGGATG TGTATGTGCC AGGTTGTCCG
CCAAGGCCGG AAGCAATTCT GGATGGTTTT GGAAAGATAC AGGAGCTGGT GAGAAACGAG
TCGTCAAGAA GAAGGAACTC TGAGCAGTAC AAGGAAATGT TGGCTTCATA CGGAATACTA
TAA
 
Protein sequence
MSDINIVEAP PGIEGSGFFA TSLDKVIGLA RSHSLWPLPF ATSCCGIEFM ATMGSHYDFG 
RFGSERLSFS PRQADLLMVM GTIAKKMSPV LKQVYLQMAE PRWVMAVGAC ASSGGIFDTY
SVLQGIDEII PVDVYVPGCP PRPEAILDGF GKIQELVRNE SSRRRNSEQY KEMLASYGIL