| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4071 |
|---|
| Symbol | |
|---|
| ID | 8255205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4914035 |
|---|
| End bp | 4915927 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644937735 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_003094324 |
|---|
| Protein GI | 255533952 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0380631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATT TAGTTTGGCT GGTTCCGTTG ATCCCTCTGT TAGGCTTTGT AATTAATGGC
CTTGGCAGAA ATTCATTATC CAAAAGCCTG ATCGGTTTTA TAGGGAGCAG TGTCATATTC
ATTTCATTTG CCATTAGCTT GGGGATATTT TTTGAGCTGG GTGCTGATGC GAACAAATCG
CACGAAATAT TTCTTTTTAA CTGGATCAGT GCCGGAACAC TCGAGATTCC CTTGTCCTTC
CTGGTAGATC CATTGAGTTC TTTAATGCTG CTGATCATTA CCGGTGTAGG TTTTCTGATC
CACATTTATT CTATTGGCTA TATGCATAGC GATGAGGGTT TTGGTAAGTT TTTCAGTTAC
CTGAACCTGT TCATTTTCTT TATGTTGCTG CTGGTTTTAG GCTCCAACTA TATTGTGATG
TTTATTGGCT GGGAGGGTGT AGGACTTTGT TCTTATCTGC TGATCGGCTT TTGGTACACC
AACAGCAGTT ATGCTTCGGC CGCCAAAAAA GCATTTGTAA TGAACCGTAT TGGCGACCTT
GGCTTTTTAC TCGGTGTATT TCTGATCTTT ACTACTTTTG GAAGTGTAGA GTTTGGTAAA
ATCTGGCCTC AGGCTGCCAA TATGCTGCCA GGTAATGGTA CCATTGCTTT AATTGCCTTA
TTGCTGTTTA TCGGTGCCTG CGGTAAATCT GCCCAGCTGC CTTTATTTAC CTGGCTGCCG
GACGCGATGG CGGGTCCAAC TCCGGTTTCT GCCCTGATCC ACGCAGCCAC GATGGTTACT
GCTGGTATTT ATATGATCGC CAGATCGAAC CTGCTGTTTG ACCTGGCCCC GATGATCCAG
CATGTCATTG CCATTGTTGG CCTGGCTACG GCCATTGTTG CGGCCATTAT TGCACTTACA
CAAACAGATA TTAAAAAGGT CCTGGCCTAT TCAACCGTAT CCCAATTGGG CTATATGTTC
TTAGGTTTGG GGGTTGGTGC GTATAATGGT GCGTTCTTCC ATGTCATAAC GCATGCTTTC
TTTAAAGCAT TATTGTTCTT ATGTGCAGGT TCGGTGATCC ATGCCTTGCA CCACGAACAG
GATATGCGCC ATATGGGTGG CCTGCGTAAA AAATTACCGG TTACTTTTAT CACCATGCTG
ATCGGTACCA TTGCCATTGC TGGTTTACCT CCATTCTCGG GCTTCTTTTC TAAAGATGAA
ATTTTAGCCC ATGTTTATCT GCATGATAAA GTGATGTGGG GAATTGCCGT ATTTGGGGCT
TTCTTAACTG CATTTTATAT GTTCAGGATG TTGTTCCTTA CTTTTTACGG AAAGTACCGC
GGTACACACC ATGCAGAAGA GAATATTCAT GAATCACCAA AATCCATGAC TGTTCCTTTA
ATTGTCCTGG CTGTTTTATC TGCCTTTGGC GGAATAATAG GCATCCCTGA GGCATTGGGT
GGTAACCACT GGTTGTCACA CTGGCTGTCA CCAGTGATTA AACATGTTGC TGAAGCCCCG
GATCATGCTA CAGAATACAT GCTGATGGCA GTTTCTGTAG TTGGTGTGCT GGTCTCTATC
GGAGTAGCGT ATGGTAAATA CGTGAAACAA AACCACATCC CTGTACCCGA TGAAGCCAAA
CGCCCGGCAT TGGCCAGTCT GTCTTACCAC AAGTTTTATT TTGATGAAAT ATATGATGCG
TTGATCAGAA AGCCTTTGGA TGCAATCTCC GGGTTTTTAT ATAAAATTGT GGACAATAAG
ATTGTAGATG GCATTGTAAA CGGTTTGGGC TGGACAGCTG CTGAGGGGAG TAAAGGCTTG
CGCCTGCTCC AGTCCGGAAA CGTAGGCTTT TATATTTTTA TGATGGTGGT AGGCATCATC
TCGTTGTTAT TGTATACTTA TTTATCTCTA TAA
|
|---|
| Protein sequence | MINLVWLVPL IPLLGFVING LGRNSLSKSL IGFIGSSVIF ISFAISLGIF FELGADANKS
HEIFLFNWIS AGTLEIPLSF LVDPLSSLML LIITGVGFLI HIYSIGYMHS DEGFGKFFSY
LNLFIFFMLL LVLGSNYIVM FIGWEGVGLC SYLLIGFWYT NSSYASAAKK AFVMNRIGDL
GFLLGVFLIF TTFGSVEFGK IWPQAANMLP GNGTIALIAL LLFIGACGKS AQLPLFTWLP
DAMAGPTPVS ALIHAATMVT AGIYMIARSN LLFDLAPMIQ HVIAIVGLAT AIVAAIIALT
QTDIKKVLAY STVSQLGYMF LGLGVGAYNG AFFHVITHAF FKALLFLCAG SVIHALHHEQ
DMRHMGGLRK KLPVTFITML IGTIAIAGLP PFSGFFSKDE ILAHVYLHDK VMWGIAVFGA
FLTAFYMFRM LFLTFYGKYR GTHHAEENIH ESPKSMTVPL IVLAVLSAFG GIIGIPEALG
GNHWLSHWLS PVIKHVAEAP DHATEYMLMA VSVVGVLVSI GVAYGKYVKQ NHIPVPDEAK
RPALASLSYH KFYFDEIYDA LIRKPLDAIS GFLYKIVDNK IVDGIVNGLG WTAAEGSKGL
RLLQSGNVGF YIFMMVVGII SLLLYTYLSL
|
|---|
| |