| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4065 |
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| Symbol | |
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| ID | 8255199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4907875 |
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| End bp | 4908579 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937729 |
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| Product | protein of unknown function DUF558 |
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| Protein accession | YP_003094318 |
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| Protein GI | 255533946 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATGTTT TTTATACGCC TGACATCGGT TCGGATGTGT ATGTATTAAA TGAGGAAGAG
AGCAGGCATT GCACCAGGGT ATTGCGTCTG GGTACTGGTG CCGTTGTTTA TCTGATTGAT
GGCATTGGCG GCCTGTATAA GGCCGAAATT ACCGGTGAAA CTAAAAGACA GGTAAATCTA
AGGATCATTG AGGTCCAAAA AGAATATCAC AAACGCCGGC ATTACCTTCA CATTGCTGTC
GCACCTACAA AAAATATAGA CCGGCTGGAG TGGTTCCTGG AAAAGGCTAC TGAAATCGGC
ATTGAAGAAA TCACCCCGGT GATCTGCGAC AGGTCGGAAC GTAAGGTGGT TAAAGAAGAC
CGTTTAAATA AAGTGATCAC TGCCGCAGTA AAGCAGTCGT TACAAGCCTA TCACCCCCGC
TTAAACCCTC AAATTAGCCT ATCAGCTTTT CTGAAGCAAA AGAATGACAG CCTTAAAATG
ATAGCCCATT GTGTAGATGC GGCAGCCAGA CAGTACATTA GTGATGTGGT AAAGCCTGCG
GGCAGCTATA CGATACTGAT CGGACCGGAA GGTGATTTTA CAGGCCAGGA AATTGAAATG
GCTTTGCAAA GCGGTTATAA ACCCTTAACT TTAGGTAATA CCCGGTTGCG GACAGAGACA
GCTGCCTTAG CGGCATGTTT TGAAGTGAAT TATTTGAACA GATGA
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| Protein sequence | MHVFYTPDIG SDVYVLNEEE SRHCTRVLRL GTGAVVYLID GIGGLYKAEI TGETKRQVNL
RIIEVQKEYH KRRHYLHIAV APTKNIDRLE WFLEKATEIG IEEITPVICD RSERKVVKED
RLNKVITAAV KQSLQAYHPR LNPQISLSAF LKQKNDSLKM IAHCVDAAAR QYISDVVKPA
GSYTILIGPE GDFTGQEIEM ALQSGYKPLT LGNTRLRTET AALAACFEVN YLNR
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