| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4060 |
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| Symbol | ispF |
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| ID | 8255194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4903082 |
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| End bp | 4903561 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937724 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_003094313 |
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| Protein GI | 255533941 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATTA AAGTAGGTTT CGGGTTTGAT GTACACCAGT TGAAAGAAAA TCATCCGTTC
ATCATAGGAG GGGTCAACCT GGAACATCAT AGCGGGGCTT ATGGACATTC GGATGCCGAT
GTGCTTCTGC ATGCTATATG CGATGCTTTA CTGGGGGCAG CCAATTTAAG GGATATCGGT
TTTCATTTTA AAAATACAGA TCCCCGCTGG AAAGGGATCA GCAGCCTGAT CCTGTTACAG
GAAACGGTAA AATTGTTACA TGAAAAAGGT TATGGGATTG GCAATATAGA CGCGATGCTG
TGTATTGAAG CGCCTAAAAT CAATCCGCAC ATTCCTGCTA TGCAACAAAA TATTGCTGAA
GCCGCGGGTA TATCTGTAGA AGATATTTCC ATCAAAGCGA CTACCAATGA GCAAATGGGC
TTTATTGGCC GGGAAGAGGG GGTTGTGGCG TATGCAGTGT GTTTGATTGA AAAAAGATAA
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| Protein sequence | MKIKVGFGFD VHQLKENHPF IIGGVNLEHH SGAYGHSDAD VLLHAICDAL LGAANLRDIG
FHFKNTDPRW KGISSLILLQ ETVKLLHEKG YGIGNIDAML CIEAPKINPH IPAMQQNIAE
AAGISVEDIS IKATTNEQMG FIGREEGVVA YAVCLIEKR
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