Gene Phep_4058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4058 
Symbol 
ID8255192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4901480 
End bp4902010 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content40% 
IMG OID644937722 
ProductYceI family protein 
Protein accessionYP_003094311 
Protein GI255533939 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.675999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTA CAACCTGGAC ATTAGATCCT ACACACAGTG AACTGCAGTT TAAAGTAAAA 
CACCTGATGA TCACTACCGT AACCGGTAGC CTGAATGTAC TGACTGCATC ATTAACTTCA
GAATCTGACG ATTTTGAAAA TGCACAGGTA AAATTTGAGG CAGATACGGC TTCTATAGAT
ACGGGAAATA ATGACCGCGA CAACCACCTG AAAAGTGGAG ATTTCTTTAA TGCAGATGAA
TTTCCCAAAG TATCCTTTGT ATCAACTTCT TTCACTAAAG ATGGGGGTGA TTACACTTTA
AAAGGCGATT TAACGATTAA AGATGTAACA AAACCTGTAA AACTGGCTGT TGAATTTGGT
GGTATCGCCA CCGATCCATG GGGCAATACC AAAGCTGGAT TTACCATCAG TGGAAAAATC
AACAGAACAG ATTTCGGTTT AAACTGGAAT GCGGCATTAG AAACCGGTGG GGTAATGGTA
AGTGAAGAAG TTAAAATTTT AGGCGAACTG CAGTTTGTAA AACAAGCCTG A
 
Protein sequence
MATTTWTLDP THSELQFKVK HLMITTVTGS LNVLTASLTS ESDDFENAQV KFEADTASID 
TGNNDRDNHL KSGDFFNADE FPKVSFVSTS FTKDGGDYTL KGDLTIKDVT KPVKLAVEFG
GIATDPWGNT KAGFTISGKI NRTDFGLNWN AALETGGVMV SEEVKILGEL QFVKQA