| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4000 |
|---|
| Symbol | |
|---|
| ID | 8255134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 4830365 |
|---|
| End bp | 4831330 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644937664 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_003094253 |
|---|
| Protein GI | 255533881 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCAC AATTAAACAA AAAAGCCTCT CCCTTAATCG TTATCCTGGC CTTTGCCATA
GTATATATCG TTTGGGGCTC TACTTACTTT TTTATCCAGA AAGCCCTCGC CGGCTTTCCT
CCTTTTATCC TTGGTGCCTT CAGGTTCCTT GCGGCCGGAC TGTTGTTAAT AACATGGTGC
AGCATTAAAG GGGAAAAGAT TTTTGATAAA AAAAGTATCA GACAGGCTGC CATAGCGGGC
ATACTGATGC TTGGGATAGG CAACGGACTG GTGATCTGGG TAGAACAATC TATACCAAGC
GGATTGGTTG CCATCCTGGT TTCATCTGCA GCCATGTGGT TCGTAATTCT GGACAAACCG
AAATGGAAAG AAAACCTGCA AAGTACCTCT ACAGTAATGG GATTGATTAT AGGGTTTATA
GGTGTTATCC TACTATTTGC AGAACAGGTA ATGCATACGC TGAACAACAA CCAGAGCAAC
ACTCAAATTG TAGGTATTGT ACTTTTACTG CTGGCACCAA TAGGATGGGC AGCGGGTTCC
CTGTATTCAA AATACAATAC GACCACTACC GTTTCGGTAT CTGTAAATAC CTCCTGGCAA
ATGCTGGCCG CCGGTATCGC TTTTATGCCG GGTATCCTGT TCAATTCAGA ACTTAAAGAT
TTCGATTGGC ATATGGTATC AGCTGATGCC TGGTTATCAG TTGGCTATCT GGTCATATTT
GGCTCTATTG CTGCTTTTAG TGCGTACGTA TGGCTATTAA GTGTACGCCC GGCAACACAG
GTGAGCACGT ATGCCTATGT AAACCCCGTA GTAGCTGTTT TGCTGAGTAT ACTTTTTACC
AGCGAAAAGG TCACTATAAT CCAGGTTGCC GGATTGGTGG TCATACTGGG CAGTGTATTG
CTCATCAACC TGGCTAAATA CAGAAAAGAG CACCAGCTTA AACAAAAAAC TGCCTACTCG
AAATAA
|
|---|
| Protein sequence | MPSQLNKKAS PLIVILAFAI VYIVWGSTYF FIQKALAGFP PFILGAFRFL AAGLLLITWC
SIKGEKIFDK KSIRQAAIAG ILMLGIGNGL VIWVEQSIPS GLVAILVSSA AMWFVILDKP
KWKENLQSTS TVMGLIIGFI GVILLFAEQV MHTLNNNQSN TQIVGIVLLL LAPIGWAAGS
LYSKYNTTTT VSVSVNTSWQ MLAAGIAFMP GILFNSELKD FDWHMVSADA WLSVGYLVIF
GSIAAFSAYV WLLSVRPATQ VSTYAYVNPV VAVLLSILFT SEKVTIIQVA GLVVILGSVL
LINLAKYRKE HQLKQKTAYS K
|
|---|
| |