| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3985 |
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| Symbol | |
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| ID | 8255119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4808378 |
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| End bp | 4809808 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937649 |
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| Product | sugar (Glycoside-Pentoside-Hexuronide) transporter |
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| Protein accession | YP_003094238 |
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| Protein GI | 255533866 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.439786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA AAATAACATT AAAAGAGAAA ATCGGATATG GGTTCGGTGA TTTTGCATCA
TCCATGTTCT GGAAAATATT TTCTGTTTAC CTACTTTATT ATTATACGGA TGTATTTGGT
ATTTCGGCAG CCGTTGTTGG TACGATGTTC CTGATTACCA GGATCTGGGA CACCGCTCTT
GATCCTATTG TCGGTATTGT TGCCGATATG ACGAATTCAA GGTGGGGGAA GTTTAGACCT
TATCTTTTGT GGATGGCCAT TCCTTTTGGA ATCATCGGCG TACTGACATT TGTAGCACCC
GACCTGGATG TGAGTGGCAA GATTATTTAT GCATACCTTA CCTATACTTT AATGATGATG
GTATATTCTG CTATCAATGT ACCTTATGCC TCACTAATGG GCGTAATGAC CTCAAATGTT
AAGGACCGTA CCACTTTATC CACGTTCAGG TTTATTTTTG CTTTTGCAGG GAGTATTCTT
GTACTGGCAA CAGCAGAGCC CCTGGTGGGC TGGTTTGGTA AAGCAGGAAC AGTTGAAGAT
GTCCAAAAAG GCTGGTCGCT AACCATGATC CTGTATGCTG TTATAGCTGT TGTTTTGTTT
TATCTGACTT TTGCCTGGAC ACGGGAAAGG ATTTACCCCC CAAAAGAACA GAAAACATCC
CTAAAAACAG ATTTAAAAAA TCTGGCAACA AACAAACCAT GGTTTGTATT GTTAGGTGCG
GGGGTTTCTA CATTGATATT CAATTCGTTA CGTGATGGGT CGGCTATTTA TTATTTTAAG
TATTATTTCA AGGCCCAGGA AGCCTTTCAG CTACCTTTGA TAAATGCGCC GATTAATTAC
AGTACCCTTT ACCTGGTATT GGGTCAGGCG GCCAATATTG TTGGTGTCGT ATTGGCCAAG
CCGGTATCTG ACAAAATAGG CAAGAAGAAT ACCTTTTTCT TTGCAATGCT GGTTGCCGCC
ATCCTGAGCT GTATATTTTA TGCCTTTAAA GAAACTGATC TCTTTTTGAT CTTCTTTTTT
CAGTTTTTGA TAAGTATCTG CGCCGGAAGT ATTTTTCCGT TATTGTGGTC TATGTATGCA
GATATTGCCG ATTATTCTGA ATGGAAAACC GGCCGCAGGG CAACAGGACT GATTTTCTCC
TCCTCATCCA TGTCCCAGAA GCTGGGCTGG ACATTAGGTG GGGCGCTGAC GGGCTGGTTG
CTCGCCATCT ATGGATTTGA AGCCAATGCT GCTCAGACCA TCGAAACACA AACCGGCATA
AGAACCATGC TAAGCTTCAT TCCTGCAACC GGGGCATTAC TATCCGCCAT ATTTATCCTG
TTTTACAAGT TAAGTGATTC CTTAATGGTT TCTGTAATTG ACGCACTGGA GGAAAGAAGA
ACAAAGGAAC AGCACATCAA CATCGCGATA CAAAACGAAC GCATAGCCTA A
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| Protein sequence | MSEKITLKEK IGYGFGDFAS SMFWKIFSVY LLYYYTDVFG ISAAVVGTMF LITRIWDTAL
DPIVGIVADM TNSRWGKFRP YLLWMAIPFG IIGVLTFVAP DLDVSGKIIY AYLTYTLMMM
VYSAINVPYA SLMGVMTSNV KDRTTLSTFR FIFAFAGSIL VLATAEPLVG WFGKAGTVED
VQKGWSLTMI LYAVIAVVLF YLTFAWTRER IYPPKEQKTS LKTDLKNLAT NKPWFVLLGA
GVSTLIFNSL RDGSAIYYFK YYFKAQEAFQ LPLINAPINY STLYLVLGQA ANIVGVVLAK
PVSDKIGKKN TFFFAMLVAA ILSCIFYAFK ETDLFLIFFF QFLISICAGS IFPLLWSMYA
DIADYSEWKT GRRATGLIFS SSSMSQKLGW TLGGALTGWL LAIYGFEANA AQTIETQTGI
RTMLSFIPAT GALLSAIFIL FYKLSDSLMV SVIDALEERR TKEQHINIAI QNERIA
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