| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3979 |
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| Symbol | |
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| ID | 8255113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4797174 |
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| End bp | 4799330 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937643 |
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| Product | polysaccharide lyase family 8 |
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| Protein accession | YP_003094232 |
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| Protein GI | 255533860 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGGA GACTTTTTAT AATTATCTTA CTTATACAAT TGGTGCTTAC AGGTGTTGCA
TCGGTTTTTG GTCAGCATAA AAGCAGCCCT CAGGTATGGG CAAAAGATAT TAAAACCATC
ACAGAACGCC TTGCTGAAGA TTATCTGGCT GAAGGGGTTG ATTACCATAA AGTTGAAACG
GTAGTTTCAT CTTTAAAACA GGATGGCAGC TGGCCTGGTA TTGATTATGT TACCGTTTCA
AATGATTTCC CTGCCGGGCT TCACCTTAAA AAGCTGATGC TCATGGCCAA TGCGTATGCC
AGGCAAGGCA GTGGTTTTTA TCGCAACAAA GAACTAAGAC AAAAAATCCT GCTCGGGTAT
AATTACTATC TGGATAAAAA GCCAACATCA AAAAACTGGT GGTACAATGA TATAGGTGCC
CAGCAGGATT ATATGGCAGG CTTGATCTTG ATGAAGGGCC AGATTGCAAA TGCAGACCTT
ATCCGTTATG CTTCTTATCT AAAGGACCTT ACAGACAATC CTGCCCACAG GGGTATGAAC
AGGATATGGG TGTCGGCCAT TACCATTGCC AAAGGATGCC TGGAAAACGA CTATTTATTA
GTCGGCAAAG GCTTCCAAAG TGTAGCTGCT ACCCTGGTAA TCGCAAACGA ACAAGGCATA
GAGGGCATAA AAACCGACAA TAGTTTTCAC CAGCACCGGC CACAATTGTA TTCAGGTGGA
TATGGGATGG GCTTTGCAGA AAGTACAGCA AAGTTAATGG CCCTTTCTGC AAATACCTCT
TTTCATGCTA CCTTCTCTGC CGAGAAAAAA AGAATATTTT CAGACCTGCT CTTGTACGGA
CACCAGCTTT TCAGTTATCG TGGGGCGGTC GACTTTGGAA CTATTGGCAG AAATATCGCC
CGTCCAAATT CAATAAGTCC CATCAGTCTG GTAACATTAG ATCAGATGAT GGTCATCGAC
AGCCAGCGGA AGTCGGCATT CCGGGATTGG AAATCCCATA TACAAGGAGC GGCTTTCCCC
AAACCTTTTC TGGGGAGCAG GTATTTCTGG AAGTCAGACA TCATGACCTA CCATGGAGAA
GACTACTATC TGTCGGCAAA AGTAATCTCT ACCCGTACCA ACGGAACGGA AATGTTAAAC
GCTGAGAACC TGAAAGGATA TAACCTTCCA TTGGGGGCAA CCAATATCAT GAAGACAGGA
GGAGAATATA AAAATATCTT TCCCATATGG GACTGGACAC GTGTTCCCGG CACTACTGCA
GTGATGAACC AATCGGCTAC AGTACTGCCC TGGTATTTAT TTGGAACAAA TGAATTTGCA
GGAGGGATCA GCAATGGCGA AGCAGGCGTA ATTGCTTATG AGCACAGCTA TAATGGCGTA
CAGGCAAAAA AGGCTTATTT TCTTGTGGAT GGCTCTATGC TTTGCCTGGG TGCAGGTATC
AATGCAATCA GAACACAGCA GGTGGTCACC TCAGTTAATC AATGTTATCA GGATGGCGAG
GTGGTTACTG GTGGAAAAGG CAATGTAGAA GGAACCCGCT TTACAGATAG CCTGAGCACC
TCTAAAGGCG TGGAACTTCA TTGGGTTTAC CATGCCGGTG TGGGCTATAT CTTTCCTGCC
GGAGGAAACC TTACCCTGAA GAACGCTGTG CAGACTGGCT CCTGGAAATC CATCAATCAA
AGTGGAAGTG AGGAGCTCAT CAGCAAACCG GTTTTTAGTC TGTGGCTTAA CCATGGCACA
GCTCCATCCG AAGACAGTTA CTGTTATATC GTGCGCCCGG AGCATTCTTT AGAAAGCTTT
AAAAGTCATG TTCATGCAAA TGGCTTTATA ATCCTTAAAA ATGACAAGAA TATACAGGCC
GTAAAATATG GACATAGCTA TTTTGTTGTA TTTTACAAAC CGGGAGCAGT TGATCTCGGA
AAAAATCTGC AGGTTTCTTC AGATTCAAAA GCAGTATTCA TGATGGAAGA GAAAGAGGAT
GGTTATCAGT TGTCGCTTGC AGATCCTACC CATCAGCAAA AAGAAGCGAA CTTATCCTTC
AGCTTATTAA AAGATGCAGC TACCCCCTCT CAGGAAAATG GTACAACAAG ACTCAACTTT
ATATTTCCAC AGGGTGACGA TCAGGGTAGT GCCGTAAACA GATTTTATAA AAAATAA
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| Protein sequence | MARRLFIIIL LIQLVLTGVA SVFGQHKSSP QVWAKDIKTI TERLAEDYLA EGVDYHKVET
VVSSLKQDGS WPGIDYVTVS NDFPAGLHLK KLMLMANAYA RQGSGFYRNK ELRQKILLGY
NYYLDKKPTS KNWWYNDIGA QQDYMAGLIL MKGQIANADL IRYASYLKDL TDNPAHRGMN
RIWVSAITIA KGCLENDYLL VGKGFQSVAA TLVIANEQGI EGIKTDNSFH QHRPQLYSGG
YGMGFAESTA KLMALSANTS FHATFSAEKK RIFSDLLLYG HQLFSYRGAV DFGTIGRNIA
RPNSISPISL VTLDQMMVID SQRKSAFRDW KSHIQGAAFP KPFLGSRYFW KSDIMTYHGE
DYYLSAKVIS TRTNGTEMLN AENLKGYNLP LGATNIMKTG GEYKNIFPIW DWTRVPGTTA
VMNQSATVLP WYLFGTNEFA GGISNGEAGV IAYEHSYNGV QAKKAYFLVD GSMLCLGAGI
NAIRTQQVVT SVNQCYQDGE VVTGGKGNVE GTRFTDSLST SKGVELHWVY HAGVGYIFPA
GGNLTLKNAV QTGSWKSINQ SGSEELISKP VFSLWLNHGT APSEDSYCYI VRPEHSLESF
KSHVHANGFI ILKNDKNIQA VKYGHSYFVV FYKPGAVDLG KNLQVSSDSK AVFMMEEKED
GYQLSLADPT HQQKEANLSF SLLKDAATPS QENGTTRLNF IFPQGDDQGS AVNRFYKK
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