| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3949 |
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| Symbol | |
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| ID | 8255083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4748933 |
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| End bp | 4751404 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644937613 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_003094202 |
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| Protein GI | 255533830 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.256427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTTA AAAGAACGAT AACTGCAATA CTTTTTATAT TTTCCTTTCT GGTCTGTCAA
CAGGCTTTTT CTCAAGCTAA TTATGCCAAT GTGAAGGTAG ACGAATTGTC TGATGCGCAG
ATTTTGCAGA TGATCAAAAG GGCTGAATCC ATAGGGTATA CCGAAGCGCA GCTGGAGCAG
ATGGCTGCAG CGCAGGGGAT GAAACCTGAG GAGGCCCAGA AATTGAAATT AAGGGTTGAA
AAATTACGTA AACAAGGATC TGCAGCTACA CAGGTCGATA CCAAGGTGGT TAGCACTGGT
CGCGAAAACA GTGAAACTAC TGATGGTGGG GCTGTTGACA ATGAAAAAAA GATAAAGGAT
GAAGAGATTG GTCCTAAAAT ATTTGGGGCG GAGTTGTTCA GGAATGGGAG TATAACTTTT
GAACCGAATC TGCGTATAGC TACACCTAAA GGTTATGTAA TTGGGCCTGA TGATAAGTTG
TTGATCGATT TAACGGGCGA TAATGAGGCC AGCTATAACT TGCAGGTTAG TCCTGAAGGG
ATAATTAATT TACAATATGT TGGTCGGATT GCAGTTGGAG GATTGACCAT TGATCAGGCA
ACATCGAAGA TTCGTACTGC AATGGGTAAA ACTTACCCTT CCTTACGCTC TGGACGTACC
AATCTGGCCA TTAATTTAGG AAATATCAGA AGTATCAAAG TAGTATTGAC TGGTCAGGTT
ACCAAGCCCG GCACTTATAC ATTGTCATCA CTGGCTACAG TTTACAATGC ATTATATGCT
TCTGGTGGGC CTTCTCAAAA TGGCTCCTTC CGTAAAATAC AACTGATCCG CAACAATAAG
GTAGTTTCTA CTATTGATGT ATATGATTTC TTATTACGTG GAATTCAGCA GGACAATATC
CGTTTGCAAG ATCAGGATGT GATCAATATA CCTGTTTACG ACAAGCGGGT TGAGATTCTG
GGTGAAGTAA AAAATGGGGC CTTATTTGAA GTGGTTACAG GAGAAACTTT GCAGGATCTG
ATTGGCTTTG CTGGTGGTTT TACTACACAG GCTTATACAG CTAAGATCAA ATCTTTCCAG
AATACAGACA AGGAACGTCG TATAATAGAT ATTGCTGCTG TTGATTTTGG AACTTATGCG
CCTAAAAATG GTGATAAATA TGTGGTTGAA GCAATTTTGG ATCGGTTCCA GAATAGAGTA
GAGATTCTTG GAGCTGTTTT TCGCCCGGGA TTGTATGAGT TGGGAAATGG ACTTACTTTA
AAAGGCTTGA TCACTAAAGC TGACGGCTTA ACCGAAGATG CATTCTTGAA CAGGGGCTAT
ATAAATCGCT TAAATGCAGA CAATACGCAA AGCTTAATTT CTTTTGATGT AGCCAAAGTT
ATAGCAGGTA CGCAGGAGGA TGTAGTTTTA CAAAGAGAAG ATAAAATAAC CATTTCTTCC
TTATTTGATT TACGTGATGA ATATAAAGTA ACTATTCAGG GCGAGGTGCG CGCTGGAGGT
ACATTTGATT ATGCAGATAA CATGACGCTT GAGGATGTGA TTCAGATGGC TGGTGGTTTT
AAAGAAAACG CTACTGCTAA AAGAATCGAG ATTTCACGTA GGATAAAAAA TAGTGATGCA
AAATCTGTTT CGGCTAAAAC CGCACAGGTA TTTACTGTTG GAGTTGATCA GAATTTGAGG
GTAATAGACA AGAAATTTGT GTTAAAACCA TTTGATGTGA TTGCCGTTCG GAGTTCTGAA
GGGTATCAAG TGCAAAAACA AGTTAAGTTG GAAGGGGAGG TGTTGTATCC TGGACTTTAC
ACGATTACCC AGAAGAACGA ACGGATCTCT GATCTGATCA AAAGAGCTGG AGGCTTGACT
CCGACAGCTT ATACTGAAGG GGCTTCTTTA AAGAGACCGG GAGCTGAAAA GGTGAATCCG
GGAGATAAAA ATGCGATTGA TAATAAGGAG GAAGATGATA AAAAGTTTTT GAATTTAAAA
CGCGCGCAGG AAGCCGGTGT TAAGGATACA ATTAAGGCAG AAGTGGAACA GAAGTTAATT
CAATCAGATT TAGTTGGTAT AGATCTGGAA AAGATTTTGA GAAAACCGCA ATCCAGGTAC
GATTTAATTG TTGAAGATGG TGATGTCATC AGGGTGCCAA GACAATTGCA GACTGTAAAA
GTTACAGGTG AAGTTTTAAA TCCAAATAGT ATAGTTTATT TGCCGGGAAA AAGTTTTCAG
CAATATGTAA ATGGGGCTGG AGGATTTACC TCAAGCGCTT TGAAAAAAGG AGCATATATT
AAGTATGCAA ATGGCTCTGT TGAAGCAGGA AGTAAGTTTT TGTTCTTTAA TAATTATCCG
AAGGTAAAAC CTGGAGCAGA AATATTAGTA CCTAAGAAGG CAGAAAGAGA AAGAATGACA
GCTCAAGGAT GGATTGGATT GGGAACAGCA GTTGCGTCAC TTGGGGCTAT TATCGTAAGT
TTATTGAGAT GA
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| Protein sequence | MNFKRTITAI LFIFSFLVCQ QAFSQANYAN VKVDELSDAQ ILQMIKRAES IGYTEAQLEQ
MAAAQGMKPE EAQKLKLRVE KLRKQGSAAT QVDTKVVSTG RENSETTDGG AVDNEKKIKD
EEIGPKIFGA ELFRNGSITF EPNLRIATPK GYVIGPDDKL LIDLTGDNEA SYNLQVSPEG
IINLQYVGRI AVGGLTIDQA TSKIRTAMGK TYPSLRSGRT NLAINLGNIR SIKVVLTGQV
TKPGTYTLSS LATVYNALYA SGGPSQNGSF RKIQLIRNNK VVSTIDVYDF LLRGIQQDNI
RLQDQDVINI PVYDKRVEIL GEVKNGALFE VVTGETLQDL IGFAGGFTTQ AYTAKIKSFQ
NTDKERRIID IAAVDFGTYA PKNGDKYVVE AILDRFQNRV EILGAVFRPG LYELGNGLTL
KGLITKADGL TEDAFLNRGY INRLNADNTQ SLISFDVAKV IAGTQEDVVL QREDKITISS
LFDLRDEYKV TIQGEVRAGG TFDYADNMTL EDVIQMAGGF KENATAKRIE ISRRIKNSDA
KSVSAKTAQV FTVGVDQNLR VIDKKFVLKP FDVIAVRSSE GYQVQKQVKL EGEVLYPGLY
TITQKNERIS DLIKRAGGLT PTAYTEGASL KRPGAEKVNP GDKNAIDNKE EDDKKFLNLK
RAQEAGVKDT IKAEVEQKLI QSDLVGIDLE KILRKPQSRY DLIVEDGDVI RVPRQLQTVK
VTGEVLNPNS IVYLPGKSFQ QYVNGAGGFT SSALKKGAYI KYANGSVEAG SKFLFFNNYP
KVKPGAEILV PKKAERERMT AQGWIGLGTA VASLGAIIVS LLR
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