Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3931 |
Symbol | |
ID | 8255065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4731169 |
End bp | 4732713 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644937595 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_003094184 |
Protein GI | 255533812 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.849144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0165624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCTT TTATTAAAAT TTATCTTTGG CAAATCTTGT CTTTAATCAG TGGATTTGCT ACGATGGTTA TTGTAACCCC ATTTTTATCT TCAAACCCAT ACTTGTTTGG GATTTATTCG GTTGTGATGT CCATGTCCTT GTTTCTGGCC TATGCTGATT TGGGGTTTTT AAGTGCCGGA GCTAAGTATG CGAGTGAGTA CGCCGTCCGA AATGAGCGTA AACAAGAAAT TGAGATTATA TCCTTTGTGA CATTCATTCT TGGTGGTTTT GTTTTATTGA TTTCAATAGT GGCTCTTGTT TTTTCTTTCC TGCCACATTT GCTAATTAAA AGTCTACCTG ATTTGAATTC CAAGAATGTT GCTAGTACAT TGTTATTGGT GTTTGCTTTA TCTACTCCAC TCTTAGTTTT ACAAAGAAGT GTGCAGATCA TTTTTAACAT TAGATTAAAA GATTATCTGT ACCAACGTAT CTTTACAGCT TCAAATATTA TAAAGATTTT ATCCTCTTTC TTTTTTTTCG GAAGAGGCAA GTACCTGTTA GTGGAATACT TCATATTTAG CCAGTTTGTA GGTTTGATCG CGGTGATTTT AGCATTATTA CTTGCTAAAA AGTCATTTAA CTATAACTTG AAAATGTACT TCGCATCTAT AAAATTTAGT AAAGAAATTT TTAATAAAAC GAAAAAATTG GCTTTTAGCA GCCTCTTCGT AACTATTGCA TGGATCGTTT TTTATGAAAT AGACCTATTT GTTATCGGCA AGTTTATTGG TGCTAAAGGG GTTGCTATTT TTAGTCTATC GATAACCTTA ATGGCATTGT TTCGATCATT ACATAGTATT ATATACAACC CTTTTACAGC AAAATTTAAT CATTATATTG GAAAAAGAGA CTTTTCTGGA TTTAATAGAG CTTTTTATAA AGTTTTGGTT CTTGGATTAC CTTTATCTGT ATTTCCTACG TTGATTGTAG CTTTTACAAT TAAGAGTTTT ATATACAGTT GGGTTGGAAT AGAATATGAG GAGGTTATTC CTATAGTCAG AATTATGCTG TTTATATATC TGTTTAATTT TATCGCAAGC CCGGCTAGTA TCGCACTTGT TGCACACGAA AGAATTCGTA GTATTTATTT GACTACAGCA ATAATGCCTT TAATATATTG GGGAGGAATT ATAGTCACGT ACAATTTTTG GGGATTACAG TCTTTTGCAA TTTTTAAGTT ATTTGCATTC TCGTTGTCAT CGATGGTTTA TTCCTATTTA TCTATTAAAT TATTTGGAGT TGATTTTAAA CAATTCTTAA GTAGGAATGT CCTTCAGGCA ACTATCGTGT CAATTGCCTT ATATTTTATT GTATATTATA CTCAGACATA TCTTCCCTAT TTTAAGAAGC CTGGAAATCT TTTTAAGTAT ACAATGTTGT GTTCGGGATA TCTGGTATTC AGTTTAGTCC TTTATTATTT ATTGTCGTCT CAGTTTAGAA AAACTATACT GGAGTTTTTG CCAAGCTTTT CGAAATTATT TAAGTTTAAA AGAGAAAGTA TATGA
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Protein sequence | MSSFIKIYLW QILSLISGFA TMVIVTPFLS SNPYLFGIYS VVMSMSLFLA YADLGFLSAG AKYASEYAVR NERKQEIEII SFVTFILGGF VLLISIVALV FSFLPHLLIK SLPDLNSKNV ASTLLLVFAL STPLLVLQRS VQIIFNIRLK DYLYQRIFTA SNIIKILSSF FFFGRGKYLL VEYFIFSQFV GLIAVILALL LAKKSFNYNL KMYFASIKFS KEIFNKTKKL AFSSLFVTIA WIVFYEIDLF VIGKFIGAKG VAIFSLSITL MALFRSLHSI IYNPFTAKFN HYIGKRDFSG FNRAFYKVLV LGLPLSVFPT LIVAFTIKSF IYSWVGIEYE EVIPIVRIML FIYLFNFIAS PASIALVAHE RIRSIYLTTA IMPLIYWGGI IVTYNFWGLQ SFAIFKLFAF SLSSMVYSYL SIKLFGVDFK QFLSRNVLQA TIVSIALYFI VYYTQTYLPY FKKPGNLFKY TMLCSGYLVF SLVLYYLLSS QFRKTILEFL PSFSKLFKFK RESI
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