Gene Phep_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3931 
Symbol 
ID8255065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4731169 
End bp4732713 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content32% 
IMG OID644937595 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_003094184 
Protein GI255533812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.849144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0165624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTT TTATTAAAAT TTATCTTTGG CAAATCTTGT CTTTAATCAG TGGATTTGCT 
ACGATGGTTA TTGTAACCCC ATTTTTATCT TCAAACCCAT ACTTGTTTGG GATTTATTCG
GTTGTGATGT CCATGTCCTT GTTTCTGGCC TATGCTGATT TGGGGTTTTT AAGTGCCGGA
GCTAAGTATG CGAGTGAGTA CGCCGTCCGA AATGAGCGTA AACAAGAAAT TGAGATTATA
TCCTTTGTGA CATTCATTCT TGGTGGTTTT GTTTTATTGA TTTCAATAGT GGCTCTTGTT
TTTTCTTTCC TGCCACATTT GCTAATTAAA AGTCTACCTG ATTTGAATTC CAAGAATGTT
GCTAGTACAT TGTTATTGGT GTTTGCTTTA TCTACTCCAC TCTTAGTTTT ACAAAGAAGT
GTGCAGATCA TTTTTAACAT TAGATTAAAA GATTATCTGT ACCAACGTAT CTTTACAGCT
TCAAATATTA TAAAGATTTT ATCCTCTTTC TTTTTTTTCG GAAGAGGCAA GTACCTGTTA
GTGGAATACT TCATATTTAG CCAGTTTGTA GGTTTGATCG CGGTGATTTT AGCATTATTA
CTTGCTAAAA AGTCATTTAA CTATAACTTG AAAATGTACT TCGCATCTAT AAAATTTAGT
AAAGAAATTT TTAATAAAAC GAAAAAATTG GCTTTTAGCA GCCTCTTCGT AACTATTGCA
TGGATCGTTT TTTATGAAAT AGACCTATTT GTTATCGGCA AGTTTATTGG TGCTAAAGGG
GTTGCTATTT TTAGTCTATC GATAACCTTA ATGGCATTGT TTCGATCATT ACATAGTATT
ATATACAACC CTTTTACAGC AAAATTTAAT CATTATATTG GAAAAAGAGA CTTTTCTGGA
TTTAATAGAG CTTTTTATAA AGTTTTGGTT CTTGGATTAC CTTTATCTGT ATTTCCTACG
TTGATTGTAG CTTTTACAAT TAAGAGTTTT ATATACAGTT GGGTTGGAAT AGAATATGAG
GAGGTTATTC CTATAGTCAG AATTATGCTG TTTATATATC TGTTTAATTT TATCGCAAGC
CCGGCTAGTA TCGCACTTGT TGCACACGAA AGAATTCGTA GTATTTATTT GACTACAGCA
ATAATGCCTT TAATATATTG GGGAGGAATT ATAGTCACGT ACAATTTTTG GGGATTACAG
TCTTTTGCAA TTTTTAAGTT ATTTGCATTC TCGTTGTCAT CGATGGTTTA TTCCTATTTA
TCTATTAAAT TATTTGGAGT TGATTTTAAA CAATTCTTAA GTAGGAATGT CCTTCAGGCA
ACTATCGTGT CAATTGCCTT ATATTTTATT GTATATTATA CTCAGACATA TCTTCCCTAT
TTTAAGAAGC CTGGAAATCT TTTTAAGTAT ACAATGTTGT GTTCGGGATA TCTGGTATTC
AGTTTAGTCC TTTATTATTT ATTGTCGTCT CAGTTTAGAA AAACTATACT GGAGTTTTTG
CCAAGCTTTT CGAAATTATT TAAGTTTAAA AGAGAAAGTA TATGA
 
Protein sequence
MSSFIKIYLW QILSLISGFA TMVIVTPFLS SNPYLFGIYS VVMSMSLFLA YADLGFLSAG 
AKYASEYAVR NERKQEIEII SFVTFILGGF VLLISIVALV FSFLPHLLIK SLPDLNSKNV
ASTLLLVFAL STPLLVLQRS VQIIFNIRLK DYLYQRIFTA SNIIKILSSF FFFGRGKYLL
VEYFIFSQFV GLIAVILALL LAKKSFNYNL KMYFASIKFS KEIFNKTKKL AFSSLFVTIA
WIVFYEIDLF VIGKFIGAKG VAIFSLSITL MALFRSLHSI IYNPFTAKFN HYIGKRDFSG
FNRAFYKVLV LGLPLSVFPT LIVAFTIKSF IYSWVGIEYE EVIPIVRIML FIYLFNFIAS
PASIALVAHE RIRSIYLTTA IMPLIYWGGI IVTYNFWGLQ SFAIFKLFAF SLSSMVYSYL
SIKLFGVDFK QFLSRNVLQA TIVSIALYFI VYYTQTYLPY FKKPGNLFKY TMLCSGYLVF
SLVLYYLLSS QFRKTILEFL PSFSKLFKFK RESI