Gene Phep_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3927 
Symbol 
ID8255061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4726887 
End bp4727762 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content32% 
IMG OID644937591 
Productglycosyl transferase family 2 
Protein accessionYP_003094180 
Protein GI255533808 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0129456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT TGTTTTCAAT TATAATACCA ACTTTTAATC GAGTTTTAGC ATTAGAAAGG 
TGTTTAAATT CACTCTTGTT ACAAAACTAT AAGAATTTTG AAGTAATCAT TTGCGATGAT
GGCTCAACAG ACAATACATT TGAAATGGTT GAAAAATTCA GGGGACAGAT TAATCTTCGC
TATTATTACA ATGAAAATTG GGGCGGTCCA GCGAAACCCA GAAATTTAGG GCTGAGTGTA
GCTTCGGGAA AGTGGATATG TTTCCTGGAT TCCGATGATT GGTACCATAA TGATAGACTT
TCATATCTTG CAAATGCAGT TAATAATGAC TTTGATGTTT ATCACCATAA TTTGCTTCGG
GTTAATAGAT CAAATGTAAT TTTGAGCAGA ATGCCAACAT GGCAAATTGA TAATAATGAC
GCAACTTTGG ATTTGCTTAC AAATTTCAAT GGAATTTTAA CTTCCTCAAC TTGTATAAGA
AAAGCAAAAC TTGATGAGCT GAAGTTGTGT TTTTCAGAAG AAAGAAAAAT TATTGGCTTG
GAGGATTTTG ATTTATGGAT ACAATTGGCA TTTGCAGGTG CGAAATTTAA ATTTCTGAAT
AAAGATTTAG GTTATTATAA TATTGAAGGC TCCGATCATA TTACATTTTT AGATCAAAGA
CAGATTGATA GGCTTTTCGA ATTGTATATG ACGAATCAAT ATAAGTTAAA ACATAAAGAT
AGAAAGAAGT CAACAGCCGC TTTTAATTAT CAAAAAGCTT GTATATTGAC GATTGGTAAA
GATATGAGTG GGGCTTCGAA GTGTTTTATG TTTGCTCTTA AATATGGGAC AAGGAAAGTT
AAAGCAAGGT CGCTTTACAA GTTATTATTT AGATAG
 
Protein sequence
MSLLFSIIIP TFNRVLALER CLNSLLLQNY KNFEVIICDD GSTDNTFEMV EKFRGQINLR 
YYYNENWGGP AKPRNLGLSV ASGKWICFLD SDDWYHNDRL SYLANAVNND FDVYHHNLLR
VNRSNVILSR MPTWQIDNND ATLDLLTNFN GILTSSTCIR KAKLDELKLC FSEERKIIGL
EDFDLWIQLA FAGAKFKFLN KDLGYYNIEG SDHITFLDQR QIDRLFELYM TNQYKLKHKD
RKKSTAAFNY QKACILTIGK DMSGASKCFM FALKYGTRKV KARSLYKLLF R