Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3925 |
Symbol | |
ID | 8255059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4724250 |
End bp | 4725563 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937589 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_003094178 |
Protein GI | 255533806 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.107099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0149623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CCGTTATTGG AACAGGGTAT GTAGGTCTGG TTACAGGTAC CTGTTTATCT GAAACAGGAA ATAATGTAAT TTGTGTAGAC ATTAATGAAG CCAAAGTAAA AAAAATGCAG GCTGGTGAAG TGCCTATTTA TGAGCCCGGG CTGGATGTGC TCTTCCACAG GAACATTGCC CAGGGCCGCT TAACCTTTAC AACAGATCTT GCCCATGCGG TTAAGGATGC CCAGATCATT TTTATGGCGC TGCCAACGCC TCCGGGTGGA GATGGTGCTG CCGATCTGTC CTATATTTTA GGGGCAGCGA AAGACATTTC AAAACTGGTG ACCAATTATA AGGTTATTGT AAACAAATCT ACCGTTCCGG TAGGAACAGC AGATAAGGTG CAGGCTGTTT TTGCAGAAAA CACGGATGTA GAAATAGACG TGGTCTCTAA CCCCGAATTT TTACGTGAAG GCGTGGCCGT GGAAGATTTT ATGAAACCGG ACAGGGTGGT GATCGGAACA CGGAGCGAGA AAGCACAGAA GTTAATGAAT GAATTGTATG GTCCTTATGT ACGTCAGGGA AATCCGATTC TGTTTATGGA CGAGCGCTCT TCTGAGCTGA CCAAATATGC TGCCAATTCA TTTCTGGCTA CAAAGATCAC TTTTATGAAC GAAGTAGCCA ACCTTTGCGA AATTGTAAAT GCCGATGTGG ATGCTGTGCG TAAAGGTATA GGTTCTGATG CAAGAATTGG TAAGCGCTTT CTTTTCCCCG GAATAGGGTA TGGCGGCAGC TGTTTTCCTA AGGATGTGCA GGCTTTGGCA AAGTCGGCTG ATGAACATAA CTATGATTTC CAGATCCTGA GGTCTGTGAT GCAGGTAAAT GAAAAGCAAA AAACTTTATT GGTGGATAAA TTGCTGAAAT ATTATAAAGG TGATTTAAAA GGTAAGCATT TTGCTTTATG GGGATTGGCC TTTAAACCCG AAACGGATGA TATCCGTGAA GCACCTTCCT TGTATATCAT TGATGAGTTG CTTAAACACG GGGCTACTGT AGCTGCTTTC GACCCTGAAG GAATGAACAA TGTTAAAGCG CTTGTTGGCG ATAAAATAAA ATATGCTGAA ACCCAGTACG ATGCACTGAT CGGTGCAGAT GCTTTATTGA TTGCAACAGA ATGGTCGGTA TTCAGGAACC CTGATTTTGA AAGAATGGAA GAAACCCTGA GCAATAAAGT TATTTTTGAT GGTCGTAACT TATATGACCT GCAAAAGATG ATCGACCTTG GATATTATTA TAACAGTGTG GGCCGTAAGC TTATCAATAA CTAA
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Protein sequence | MKIAVIGTGY VGLVTGTCLS ETGNNVICVD INEAKVKKMQ AGEVPIYEPG LDVLFHRNIA QGRLTFTTDL AHAVKDAQII FMALPTPPGG DGAADLSYIL GAAKDISKLV TNYKVIVNKS TVPVGTADKV QAVFAENTDV EIDVVSNPEF LREGVAVEDF MKPDRVVIGT RSEKAQKLMN ELYGPYVRQG NPILFMDERS SELTKYAANS FLATKITFMN EVANLCEIVN ADVDAVRKGI GSDARIGKRF LFPGIGYGGS CFPKDVQALA KSADEHNYDF QILRSVMQVN EKQKTLLVDK LLKYYKGDLK GKHFALWGLA FKPETDDIRE APSLYIIDEL LKHGATVAAF DPEGMNNVKA LVGDKIKYAE TQYDALIGAD ALLIATEWSV FRNPDFERME ETLSNKVIFD GRNLYDLQKM IDLGYYYNSV GRKLINN
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