Gene Phep_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3896 
Symbol 
ID8255030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4688373 
End bp4688900 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content37% 
IMG OID644937560 
ProductMethyltransferase type 11 
Protein accessionYP_003094149 
Protein GI255533777 
COG category[R] General function prediction only 
COG ID[COG4976] Predicted methyltransferase (contains TPR repeat) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAGT CAAAAAAAGA GCTTGAAAAA TGGTATGACT CCAATGACCC CTGGAAATAC 
GGGGCAGATA CGGAGGATAT CAAAAGAAAA AAAATATTAT TAACGGAGCT CCCGGACAGG
GAGTATGAAA CTGTACTGGA CATTGGCTGC GGCAATGGTT TTATAACGCA GGATTTACCA
GGTAATTTAA TACTGGGGGT CGATCTTTCT GAGAATGCCA TTAAATACGC ATGTGAAAAC
AATAAGGCTA CCCACATTTT TTTTGAGCAG CAGAATATTT TTGAACTTTA TCATACAGAA
AAGACTTTTG ACCTGATTGT GGTTACAGGA GTATTGTATC CACAATATAT AGGTGCCTCA
TCAAATTTAA TTTTTGTGAT CATCGACCGG TTACTCAATA AAAACGGCAT ACTGGTTTCC
GTTCATATTA ATGACTGGTA CAATTGCAGG TTTCCTTATG ATCTTTTTCG TGAACATATT
TATCCTTATA AAGAATATCT GCATAGATTG GAGGTCTACC AGAAATGA
 
Protein sequence
MIQSKKELEK WYDSNDPWKY GADTEDIKRK KILLTELPDR EYETVLDIGC GNGFITQDLP 
GNLILGVDLS ENAIKYACEN NKATHIFFEQ QNIFELYHTE KTFDLIVVTG VLYPQYIGAS
SNLIFVIIDR LLNKNGILVS VHINDWYNCR FPYDLFREHI YPYKEYLHRL EVYQK