Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3868 |
Symbol | |
ID | 8255002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4645267 |
End bp | 4646619 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644937532 |
Product | sugar transporter |
Protein accession | YP_003094121 |
Protein GI | 255533749 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA GCCAGCAACC GGTGACTTTC AAAAACAGTT ATATTCTTTG CATATCATTT ATCTCGGCAC TTGGCGGATA CCTGTTCGGT TTCGACTTTG CCGTTATATC GGGTGCACTT CCTTTTTTAC GTGTAGAGTT TGCGCTTAAT GCCTGGTGGG AAGGTTTTCT TACCGGTTCA CTTGCGTTGG GTTGTATTGT TGGCTGTCTG ATGGCAGGCA ATTTAAGCGA CCGTTATGGC CGTAAACCGG GCCTGATGCT GGCGGCACTC ATTTTTGCCC TTTCTTCCCT GGGAATGGCC TTTTCTTCCG GGCTCAGTAT TTTTGTAATG ATGCGCTTTG CGGCAGGAGT TGGGGTAGGT ATGGCCTCAA TGTTAAGCCC TATGTATATT GCGGAAGTTT CTCCCGCCAG TATCCGCGGC CGGAATGTGG CCATTAACCA GCTTACCATT GTTATTGGCA TATTGATCAC TAACCTGGTC AATTATACAC TTTCAGACAA TGGCCCGGAA GCCTGGCGAT GGATGTTTGG CCTGGGGGCA GTGCCTTCTC TCCTTTTTTT ACTGGGCGTG GTGTGGCTTC CTGAAAGTCC GAGGTGGTTA ATTAAAGAAG GCCGTTTGGA AAAAGCGAAG GCAGTATTGA ACAAGATCGG CAGTTCAGCC TATGCACAGA ACATCTATAA CGACATTGAG CTTTCCCTTA GAGGGGGAGA AAAACAATCT TATAGAGCTG TATTGGCAAA GGGTGTGCGT CCGGCAGTAA TTGTGGGCAT CACGCTGGCT GTATTCCAGC AATTGTGTGG CATCAATGTC GTATTTAATT ATACCTCAAC CATATTTGAG TCGGTGGGTG CCAGTCTGGA CCGCCAGTTG TTTGAAACGG TTGCCATTGG CATTGTAAAT CTTGTTTTTA CCCTTGTTGC CATGTGGCAG GTTGACAAGC TGGGCCGCAG GCCATTGATG CTGATCGGTT CCCTGGGCCT GTCTGTAGTA TATATTATCC TGGCATTTTT ACTTCAAAGC CATGCTGCAG CGGGTATCGT TTCTGTATTT GTATTGTTGG CAATAGCCAT GTATGCCACC TCACTTGCAC CGGTTACCTG GGTGCTCATT TCAGAGATCT TTCCAAATAA AATCAGGGGT GTAGCCTCTT CAATTGCGAT TGTATCCCTT TGGGGGGCCT ATTTTATCCT GGTATTTACA TTCCCCATCC TTGCAGAAAA ACTGGGTACC TATGGCCCTT TTTACCTGTA TGCCGGAATT TGCCTGCTTG GCTTCCTGTT TGTGAAATCC AAGGTGCGTG AAACCAAAGG AAGGACACTT GAAGAACTGG AGCAGGATTT GGTCAGACAT TAA
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Protein sequence | MSTSQQPVTF KNSYILCISF ISALGGYLFG FDFAVISGAL PFLRVEFALN AWWEGFLTGS LALGCIVGCL MAGNLSDRYG RKPGLMLAAL IFALSSLGMA FSSGLSIFVM MRFAAGVGVG MASMLSPMYI AEVSPASIRG RNVAINQLTI VIGILITNLV NYTLSDNGPE AWRWMFGLGA VPSLLFLLGV VWLPESPRWL IKEGRLEKAK AVLNKIGSSA YAQNIYNDIE LSLRGGEKQS YRAVLAKGVR PAVIVGITLA VFQQLCGINV VFNYTSTIFE SVGASLDRQL FETVAIGIVN LVFTLVAMWQ VDKLGRRPLM LIGSLGLSVV YIILAFLLQS HAAAGIVSVF VLLAIAMYAT SLAPVTWVLI SEIFPNKIRG VASSIAIVSL WGAYFILVFT FPILAEKLGT YGPFYLYAGI CLLGFLFVKS KVRETKGRTL EELEQDLVRH
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