| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3851 |
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| Symbol | |
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| ID | 8254985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4620453 |
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| End bp | 4621970 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937515 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003094104 |
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| Protein GI | 255533732 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAG ACAAAAAGAA TACACTTACC CTGGCCGCCG TTTGCCTTTC CTCATTAATG
TTTGGATTGG AAATATCTAG TGTGCCGGTA TTACTGCCCA CACTCGAAAA ATTATTAAAA
GGCAATTTCA GTGATGTACA ATGGATCATG AATGCCTATA CCATTGCTTG CACTACAGTA
TTGATGGCTT CCGGTACGCT TGCAGACCGC TATGGCCGCA AACTTGTTTT TACAGCCGGG
CTTTTGCTTT TTGGTATAAC CTCTCTGCTT TGTGGGCTGG CCACGGCGAT GCCATTACTC
ATCGCAGGAC GTTTTTTACA AGGACTTGGC GGAGGCATTA TGCTGATCTG CCAGGTTGCG
ATTCTTTCTC ACCAGTTCCA GGACGGACGC GAACGCAGCC TGGCCTTTGC CGCCTGGGGG
ATTGTTTTCG GAGTAGGCTT GGGGTTCGGG CCTCTAATTG GCGGTATGAT CCTCACATTT
TTAAGCTGGA AATGGGTGTT TCTGGTACAT GTGCCACTCA GCTTGCTTAC ACTGGGACTT
GCATGGGCCG GGGTGCGGGA ATCGCGGTCG GCTCAAATAC AGCGATTGGA TACCTTAGGG
ATGGTCACTC TTTCCTTAGC TGTTTTTGGA CTGATTTATT ACATTACCCA GGGACCCGCA
ATGGGATTTT CAAGCCTTTA CGCGCTATTG ATTCTGGGGG CATCTGCAGC TTGTTTTCTG
CTCTTTTTAT ATGCAGAAAA GACAAGCACC CAGCCTATGT TTGATTTTAC CGTATTCAGG
ATACGGGACT TTTCCGGGGC CATCATCGGC TCTATTGGCA TGAACTTTTG CTTTTGGCCC
TTTATAATCT ACCTTCCTAT CTATTTTCAG GGTGTGTTGG GGTACAGTAG CCTTATGGCC
GGTACGATGC TGCTGGCCTA TACTTTGCCT ACATTGGTAG TTCCACCACT GGCCGAGCGG
CTTTTGATGA AATACCGGCC CGGTATCGTT ATCCCATTCG GGCTTTTTAT CATCGGACTG
GGATTTATAT TGATGTGGTT TGGCATCCAT GTTGCACACA TGGGGTCGTG GACCATGATA
CCAGGTATGT TGTTGTCCGG CATCGGACTA GGGTTCTCTA ATACTACGGT TACCAACACT
ACCACAGGTG CTGTGAGTTC AGACCGTGCA GGTATGGCTT CAGGGATAGA CATGAGTGCA
AGACTGATCA CCCTGGCAAT CAATATTGCT TTAATGGGAT TCTTGTTAAG TAAAGGTGTG
CTCATTCATT TAAAGATTGC ATTCGCAGGA GTTTTTGATA GTCCTCAGCT CCATTCGGTG
GCTGAAAAGA TCGCAGCAGG AAATTTTGCT GGCCTTCTGG AAAAATATCC CAGGATTGCT
ACTTTAGACC CGGCTGGCGA TATTACACAT CAGGCATTAG CTGGCGGTTT TCAACTGCTG
ACTTTGTTCG GCGGAATTGG GGTAGTTTTC CTTGCATTGG TCAGTTTCTT TATATTTAAG
CCACGATCAA TTCGATAA
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| Protein sequence | MFKDKKNTLT LAAVCLSSLM FGLEISSVPV LLPTLEKLLK GNFSDVQWIM NAYTIACTTV
LMASGTLADR YGRKLVFTAG LLLFGITSLL CGLATAMPLL IAGRFLQGLG GGIMLICQVA
ILSHQFQDGR ERSLAFAAWG IVFGVGLGFG PLIGGMILTF LSWKWVFLVH VPLSLLTLGL
AWAGVRESRS AQIQRLDTLG MVTLSLAVFG LIYYITQGPA MGFSSLYALL ILGASAACFL
LFLYAEKTST QPMFDFTVFR IRDFSGAIIG SIGMNFCFWP FIIYLPIYFQ GVLGYSSLMA
GTMLLAYTLP TLVVPPLAER LLMKYRPGIV IPFGLFIIGL GFILMWFGIH VAHMGSWTMI
PGMLLSGIGL GFSNTTVTNT TTGAVSSDRA GMASGIDMSA RLITLAINIA LMGFLLSKGV
LIHLKIAFAG VFDSPQLHSV AEKIAAGNFA GLLEKYPRIA TLDPAGDITH QALAGGFQLL
TLFGGIGVVF LALVSFFIFK PRSIR
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