Gene Phep_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3838 
Symbol 
ID8254972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4609052 
End bp4610341 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content46% 
IMG OID644937502 
ProductPeptidase M23 
Protein accessionYP_003094091 
Protein GI255533719 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTAA ACAAATCCCT TTTACTTTTA TTATTTATAT TCTCCGTATC CCTTGTGCGT 
GCACAAAGCA GTTCGGAACT CAAAAGAAAA AAAGAAGCCA TACAAAGAGA AATTGAACTT
TTGCAGCGAA ACCTGAACAA AACGGCCAAT AACAAGAAAC TTACCTTAGG TCAGATCAAT
GCCTTGAATA CCAAAATCAA GCTGATGCAG GATAAGATCA CGGTGATCAA CTCTGAGATC
AAGAACCTGG ATAACCAGAT CCACGAAAAT ACCAATACTG TAATTACTTT AAAAGGTCAA
CTGAACCAGC TGAAGAAAGA ATATGCAGCG ATGATAAGGT TTGCACAGCG GAACAAGAAT
GCTTATGATA AAATGATGTT TATTTTTGCT GCCAAAGATT TTAACCAGGC TTACAAAAGG
ATCAAATATT TACAGCAATT TGGTCAATAC CGTAAAAAAC AGGCAGGTTA TATACAGGGC
ACGCAAAAAG ACCTGAATTA TAAGATTGTG GTGCTGGATA AGAACCTGAA GGAGAAAAGC
AGTTTATTGC ATGAGCAGGA GAACGAGAAG GACAAACTGG GTAAGAATAA ATCACAACAG
TCGGCCGTAC TGAGCAAGTA CAGCAAGCAG GAAAAGCAAT ACCGGCAGGA TATAGCTACG
CGAAAAAAAC AGCAGGCGCA GCTTGACAGG AGTATCCGTG CTGCAATTGC ACGCGAGATC
GCTTTGGAGC GTAAACGTGC TGAAGAAGCG GCGAGGGCTG CTGCTGCAAA AGCTGCCGCC
GCCGCCGCGG CAAAAGCAAG GGCCGAGAAC AGACCTGTAC CGGCAGCGCC TGTTGCCAAA
CCTAAAGAAA GCAGCGGGGG GTATATGGCG GCAACACCAG AGGCGGCACG TTTATCAGCA
GCTTTTGAAA GTAACCGCGG TTCACTGCCC TGGCCGGTGG CTGCGGGATC GATCACGGAA
AGCTTTGGAA AGCATAAGGA GGGACAGGCC AGTTATGACA ATGCCGGGGT AACCATCCAG
ACTGCAGAAG GGGCCGGTGT ACGTGCTGTA TTTAATGGGA AGGTGACCAA AGTAGGGAAC
GCACTTGGCC GGTATTATAT ATTGATCAAA CACGGGCAAT TTTTTACAGT TTACCAGAAT
TTAAGGTCGG TAAGCGTAAG CGCAGGCGAT GATGTGACCA CCAAACAGAA CATTGGCACT
GTGGCTTCTT CGGGTGATGT GCCGGAGTTG CAATTTCAGA TTTACAGGGG AACTGCGGCA
CAAAATCCCG CTGCCTGGAT AGCAAAATAA
 
Protein sequence
MKLNKSLLLL LFIFSVSLVR AQSSSELKRK KEAIQREIEL LQRNLNKTAN NKKLTLGQIN 
ALNTKIKLMQ DKITVINSEI KNLDNQIHEN TNTVITLKGQ LNQLKKEYAA MIRFAQRNKN
AYDKMMFIFA AKDFNQAYKR IKYLQQFGQY RKKQAGYIQG TQKDLNYKIV VLDKNLKEKS
SLLHEQENEK DKLGKNKSQQ SAVLSKYSKQ EKQYRQDIAT RKKQQAQLDR SIRAAIAREI
ALERKRAEEA ARAAAAKAAA AAAAKARAEN RPVPAAPVAK PKESSGGYMA ATPEAARLSA
AFESNRGSLP WPVAAGSITE SFGKHKEGQA SYDNAGVTIQ TAEGAGVRAV FNGKVTKVGN
ALGRYYILIK HGQFFTVYQN LRSVSVSAGD DVTTKQNIGT VASSGDVPEL QFQIYRGTAA
QNPAAWIAK