Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3838 |
Symbol | |
ID | 8254972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4609052 |
End bp | 4610341 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644937502 |
Product | Peptidase M23 |
Protein accession | YP_003094091 |
Protein GI | 255533719 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTAA ACAAATCCCT TTTACTTTTA TTATTTATAT TCTCCGTATC CCTTGTGCGT GCACAAAGCA GTTCGGAACT CAAAAGAAAA AAAGAAGCCA TACAAAGAGA AATTGAACTT TTGCAGCGAA ACCTGAACAA AACGGCCAAT AACAAGAAAC TTACCTTAGG TCAGATCAAT GCCTTGAATA CCAAAATCAA GCTGATGCAG GATAAGATCA CGGTGATCAA CTCTGAGATC AAGAACCTGG ATAACCAGAT CCACGAAAAT ACCAATACTG TAATTACTTT AAAAGGTCAA CTGAACCAGC TGAAGAAAGA ATATGCAGCG ATGATAAGGT TTGCACAGCG GAACAAGAAT GCTTATGATA AAATGATGTT TATTTTTGCT GCCAAAGATT TTAACCAGGC TTACAAAAGG ATCAAATATT TACAGCAATT TGGTCAATAC CGTAAAAAAC AGGCAGGTTA TATACAGGGC ACGCAAAAAG ACCTGAATTA TAAGATTGTG GTGCTGGATA AGAACCTGAA GGAGAAAAGC AGTTTATTGC ATGAGCAGGA GAACGAGAAG GACAAACTGG GTAAGAATAA ATCACAACAG TCGGCCGTAC TGAGCAAGTA CAGCAAGCAG GAAAAGCAAT ACCGGCAGGA TATAGCTACG CGAAAAAAAC AGCAGGCGCA GCTTGACAGG AGTATCCGTG CTGCAATTGC ACGCGAGATC GCTTTGGAGC GTAAACGTGC TGAAGAAGCG GCGAGGGCTG CTGCTGCAAA AGCTGCCGCC GCCGCCGCGG CAAAAGCAAG GGCCGAGAAC AGACCTGTAC CGGCAGCGCC TGTTGCCAAA CCTAAAGAAA GCAGCGGGGG GTATATGGCG GCAACACCAG AGGCGGCACG TTTATCAGCA GCTTTTGAAA GTAACCGCGG TTCACTGCCC TGGCCGGTGG CTGCGGGATC GATCACGGAA AGCTTTGGAA AGCATAAGGA GGGACAGGCC AGTTATGACA ATGCCGGGGT AACCATCCAG ACTGCAGAAG GGGCCGGTGT ACGTGCTGTA TTTAATGGGA AGGTGACCAA AGTAGGGAAC GCACTTGGCC GGTATTATAT ATTGATCAAA CACGGGCAAT TTTTTACAGT TTACCAGAAT TTAAGGTCGG TAAGCGTAAG CGCAGGCGAT GATGTGACCA CCAAACAGAA CATTGGCACT GTGGCTTCTT CGGGTGATGT GCCGGAGTTG CAATTTCAGA TTTACAGGGG AACTGCGGCA CAAAATCCCG CTGCCTGGAT AGCAAAATAA
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Protein sequence | MKLNKSLLLL LFIFSVSLVR AQSSSELKRK KEAIQREIEL LQRNLNKTAN NKKLTLGQIN ALNTKIKLMQ DKITVINSEI KNLDNQIHEN TNTVITLKGQ LNQLKKEYAA MIRFAQRNKN AYDKMMFIFA AKDFNQAYKR IKYLQQFGQY RKKQAGYIQG TQKDLNYKIV VLDKNLKEKS SLLHEQENEK DKLGKNKSQQ SAVLSKYSKQ EKQYRQDIAT RKKQQAQLDR SIRAAIAREI ALERKRAEEA ARAAAAKAAA AAAAKARAEN RPVPAAPVAK PKESSGGYMA ATPEAARLSA AFESNRGSLP WPVAAGSITE SFGKHKEGQA SYDNAGVTIQ TAEGAGVRAV FNGKVTKVGN ALGRYYILIK HGQFFTVYQN LRSVSVSAGD DVTTKQNIGT VASSGDVPEL QFQIYRGTAA QNPAAWIAK
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