| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3821 |
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| Symbol | |
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| ID | 8254955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4584881 |
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| End bp | 4585321 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937485 |
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| Product | sugar-phosphate isomerase, RpiB/LacA/LacB family |
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| Protein accession | YP_003094074 |
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| Protein GI | 255533702 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
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| TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0187638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAACCG ATAAAAAAAT TAAAATCGCA ATAGGTGCAG ATCACGCCGG CTTTGAATAC
AAGGAACTCC TAAAATCTTA TTTAAGTGAC CATGAAGTTA AAGATTTTGG CACCCACTCG
GCCGATTCTG TTGATTATCC TGATTTTGCA CATCCTGTTG CGGAAGCTGT AGAAAGTGAG
GCTTATACCT TTGGTGTACT GGTTTGCGGC AGTGCCAATG GGGTTGCCAT AACTGCCAAT
AAGCATCAGC AGATCCGCGC AGCAATCTGT TGGCAAAAGG AGATTGCCGA ACTTGCCAGA
ATGCACAACA ATGCCAACAT TATCTGTATC CCGGCAAGAT TTGTATCTGA AGAACTGGCA
AAAGAGATGG TAAGCACCTT TCTAAACACT GCTTTTGAAG GTGGGAGACA CGCTGGCAGA
GTGAATAAAA TGTCGTGCTA A
|
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| Protein sequence | MSTDKKIKIA IGADHAGFEY KELLKSYLSD HEVKDFGTHS ADSVDYPDFA HPVAEAVESE
AYTFGVLVCG SANGVAITAN KHQQIRAAIC WQKEIAELAR MHNNANIICI PARFVSEELA
KEMVSTFLNT AFEGGRHAGR VNKMSC
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