Gene Phep_3810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3810 
Symbol 
ID8254944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4575544 
End bp4576017 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content40% 
IMG OID644937474 
Producttranscription elongation factor GreA 
Protein accessionYP_003094063 
Protein GI255533691 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.138968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGG TAACATATTA TACCCAAGAT GGTTTAGATA AACTGAAAGA AGAACTGCAG 
TATTTAAAAA CTACTGGCAG GCAGCTGATT TCAAGGGCGA TAGCTGAGGC GAGAGATAAA
GGTGATCTTT CTGAGAACGC TGAGTATGAT GCTGCAAAAG AGGCGCAAGG CCTGCACGAG
GCAAAAATTG CCAAAATGGA AGCTACACTT TCTACTGCCC GGTTGATAGA TGAATCCAAA
TTGGATACAT CAAAGGTACT TGCACTTTCT ATCGTAAAGA TCAAAAATGT TAAAAATGGT
GCTACGATGT CATACCAGTT GGTAGCTGAA TCTGAGGCCG ATCTTAAAAC CGGAAAAATC
TCCGTAAAAT CACCTATTGC AAAAGGATTA TTGGGTAAAT CTGTTGGTGA TACCACAGAG
ATTGAAGTGC CCGCAGGGAA AATGGAATTT GAAATTTTAG AGATCAGCAG ATAA
 
Protein sequence
MTEVTYYTQD GLDKLKEELQ YLKTTGRQLI SRAIAEARDK GDLSENAEYD AAKEAQGLHE 
AKIAKMEATL STARLIDESK LDTSKVLALS IVKIKNVKNG ATMSYQLVAE SEADLKTGKI
SVKSPIAKGL LGKSVGDTTE IEVPAGKMEF EILEISR