Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3768 |
Symbol | |
ID | 8254900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4513973 |
End bp | 4514830 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937430 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003094021 |
Protein GI | 255533649 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0487365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGATAA AGACCGGTAA ATCCAGCATA GGATGGGTAC TTGTAGAGGC CTTGACAGCC ATATTTATTT TTATGAGTGG TAGCCCCCAG GCGCATGCCC AAAAGGCGGA AGTTAAACTG TTTGCACATC GTGGCGGTGT TATGGAGTAC GATGAAAATA CCATTCAGGC TTTTCAGGAA ACGTATAACA GGGGCTTGCG TGGCTACGAG ATCGACGTAA GAAGAACGAA GGACGGGCAA CTGGTGATCT TCCATGATGA AACTTTGGAC AGGATCGTGG GCCTTTCAAC AGGAATAGAA AAGCAAACGC TAAAAGAGTT GAAAAGCCTG AAGACGAAAA AGGGAAATGT CATCCCCACA TTGGATGAAG TATTGGCGTT TTTTAATGAT AAACCGGGCC TATATGTAGA GTTTGAAATG AAGACCAACA AACCTGCCTA CGATGAAAAT AAGCTTGTAA AATATTGTGA TGAATTGTAT AATAAGGTCC ATGCCTCAAA ACCTGCCAGG TCCACTTATG TGCTGACTTC TTTTGACAAA AGACCGTTAA GCTATTTGAA AAAGACTTAC CCTTCAGTCG ATCTTTTGTT CATTAAAGCA GAAGCATTAA ATCAAAGTGT TTTGGACGAA GCTACAGCAA TGGGAATTAA ACGACTTGGA TGCAGGGTAG ATAAAACGAC GAAGGAGATG GTTCAGCAGG CTAAAAAACA AGGCTTTTCA GTGAGCCTTT GGCCAGGTAA GTCTGTTGAT GATTTTTTAT TGGGACTTGC GCTGGGGGGT GATTATCTGT GTTCAGATGT TCCTGTGGCG ATTACCGAAT GGGCGAAAGC AAACGGTTCC TGGATTACAT TGAAATAA
|
Protein sequence | MMIKTGKSSI GWVLVEALTA IFIFMSGSPQ AHAQKAEVKL FAHRGGVMEY DENTIQAFQE TYNRGLRGYE IDVRRTKDGQ LVIFHDETLD RIVGLSTGIE KQTLKELKSL KTKKGNVIPT LDEVLAFFND KPGLYVEFEM KTNKPAYDEN KLVKYCDELY NKVHASKPAR STYVLTSFDK RPLSYLKKTY PSVDLLFIKA EALNQSVLDE ATAMGIKRLG CRVDKTTKEM VQQAKKQGFS VSLWPGKSVD DFLLGLALGG DYLCSDVPVA ITEWAKANGS WITLK
|
| |