Gene Phep_3768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3768 
Symbol 
ID8254900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4513973 
End bp4514830 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content42% 
IMG OID644937430 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003094021 
Protein GI255533649 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0487365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATAA AGACCGGTAA ATCCAGCATA GGATGGGTAC TTGTAGAGGC CTTGACAGCC 
ATATTTATTT TTATGAGTGG TAGCCCCCAG GCGCATGCCC AAAAGGCGGA AGTTAAACTG
TTTGCACATC GTGGCGGTGT TATGGAGTAC GATGAAAATA CCATTCAGGC TTTTCAGGAA
ACGTATAACA GGGGCTTGCG TGGCTACGAG ATCGACGTAA GAAGAACGAA GGACGGGCAA
CTGGTGATCT TCCATGATGA AACTTTGGAC AGGATCGTGG GCCTTTCAAC AGGAATAGAA
AAGCAAACGC TAAAAGAGTT GAAAAGCCTG AAGACGAAAA AGGGAAATGT CATCCCCACA
TTGGATGAAG TATTGGCGTT TTTTAATGAT AAACCGGGCC TATATGTAGA GTTTGAAATG
AAGACCAACA AACCTGCCTA CGATGAAAAT AAGCTTGTAA AATATTGTGA TGAATTGTAT
AATAAGGTCC ATGCCTCAAA ACCTGCCAGG TCCACTTATG TGCTGACTTC TTTTGACAAA
AGACCGTTAA GCTATTTGAA AAAGACTTAC CCTTCAGTCG ATCTTTTGTT CATTAAAGCA
GAAGCATTAA ATCAAAGTGT TTTGGACGAA GCTACAGCAA TGGGAATTAA ACGACTTGGA
TGCAGGGTAG ATAAAACGAC GAAGGAGATG GTTCAGCAGG CTAAAAAACA AGGCTTTTCA
GTGAGCCTTT GGCCAGGTAA GTCTGTTGAT GATTTTTTAT TGGGACTTGC GCTGGGGGGT
GATTATCTGT GTTCAGATGT TCCTGTGGCG ATTACCGAAT GGGCGAAAGC AAACGGTTCC
TGGATTACAT TGAAATAA
 
Protein sequence
MMIKTGKSSI GWVLVEALTA IFIFMSGSPQ AHAQKAEVKL FAHRGGVMEY DENTIQAFQE 
TYNRGLRGYE IDVRRTKDGQ LVIFHDETLD RIVGLSTGIE KQTLKELKSL KTKKGNVIPT
LDEVLAFFND KPGLYVEFEM KTNKPAYDEN KLVKYCDELY NKVHASKPAR STYVLTSFDK
RPLSYLKKTY PSVDLLFIKA EALNQSVLDE ATAMGIKRLG CRVDKTTKEM VQQAKKQGFS
VSLWPGKSVD DFLLGLALGG DYLCSDVPVA ITEWAKANGS WITLK