| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3765 |
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| Symbol | |
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| ID | 8254897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4510493 |
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| End bp | 4511413 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937427 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003094018 |
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| Protein GI | 255533646 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00344833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAAG AACTTTTAAA AAACAATACC TTAATTATAT TTTTAATATT ACTTGTCGTA
TCAAGTCTGG TCTCCAACTC CTTTCTTACC GGTAATAACC TGTCCAACCT CTTGCGACAG
GTGGCACCCA TCGGTCTGAT CAGTATCGGC ATGTTCCTGG TAATACTTAC CGGTGGAATC
GACTTATCTG TAGGGTCTAT TGTTGCAACC ATCGGTGTGG TATTTGCCCT ATTGTCTTAT
GAAGTCTATT TCCCGGTGGC CTTGACGATC TCTCTTGCAC TTGGCATTGG CATAGGGCTG
CTTTCTGGTT ACCTCGTTGC CTACCGGAAG ATCGCACCCT TTATCGCTAC GCTGGCGATG
ATGACTATTG TTCGTGGTGC AGGTTTTCTG TTTTCAAAAG GTGCACCCAT TAGTGTTGGG
CCACATTCCT CAGCCATATT GACTTTAGGC ACAGGGGCTT TTTTAGGTAT ACCGTATTCT
GCATGGATCC TGATGATCGT GTTTGCTGCG GTATATATGG TTGTGCGTTA TCATGTTTTC
GGGCGGAAAA TTTTTGCTGT TGGCTCTAAC GAAGAAGCCG TGCGTTTGTC GGGGATATCA
GTTGAAAGCG TGAAGTTTTC AGTGTATGTG ATCGCTGCAT TTTTTACCGC TATCGCTGCA
TTGATGATGG TTGGACGAAC TGGTGTCGGG ACTGCAAATA TTGGCATTGG ACTGGAACTG
GATGCAATCG CCGCGGTAGT GATTGGTGGG GCTAGTTTAT CAGGAGGAAG AGGATCTGTG
CTGAATACTC TGCTTGGGGT ATTGATATTG GGTATGATCG GTAACATTAT GAACCTTTTA
GATGTTACTT CCTATTTACA GCAACTGATC AAAGGGGTAA TTATCATTTT AGCCGTAGTT
TTTCAACGCA ATCAAAAATA A
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| Protein sequence | MKKELLKNNT LIIFLILLVV SSLVSNSFLT GNNLSNLLRQ VAPIGLISIG MFLVILTGGI
DLSVGSIVAT IGVVFALLSY EVYFPVALTI SLALGIGIGL LSGYLVAYRK IAPFIATLAM
MTIVRGAGFL FSKGAPISVG PHSSAILTLG TGAFLGIPYS AWILMIVFAA VYMVVRYHVF
GRKIFAVGSN EEAVRLSGIS VESVKFSVYV IAAFFTAIAA LMMVGRTGVG TANIGIGLEL
DAIAAVVIGG ASLSGGRGSV LNTLLGVLIL GMIGNIMNLL DVTSYLQQLI KGVIIILAVV
FQRNQK
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