Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3759 |
Symbol | |
ID | 8254891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4503788 |
End bp | 4504768 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644937421 |
Product | helix-turn-helix- domain containing protein AraC type |
Protein accession | YP_003094012 |
Protein GI | 255533640 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACATC TTACCATAAT CGTTCCGGAT GGGGAAAACA ACCTGAGCAG CATTGTAGGT GCTTATAAAA TATTTTCGAG GGCCAACAAA TATTGGGTGG AAAACGGGAG AAAAGAATTG TTCAAAATTC AGTTGGCCGG CATTTCAAAA AAAGTAGATT TTTACGATGG TTTATTCTCT GTAACGCCAC ATACCCACAT TTCGGCAATA ACCAAGACCA ATCTCATCAT TATCCCTTCA TTGAACCATA ATTATCTTAA AGCCATAACA GGGAACAAAT TGCTGGTAGA CTGGATTGAA CAGCAATATA AGGATGGTGC CGAAATTGCC AGCATATGCA CAGGGGCATT TATGCTGGCC TCTTCAGGCC TGCTGGATGG AAAAAGTTGT TCTACACATT GGGCGGCAGC GGATAATTTC AGAAGTATGT TCCCTAAAGT AAATTTACAG ACGGACCAGC TGATTACTGA TGAAAACGGG ATTTATACGA ATGGTGGCGC TTATTCTTTT CTGAACCTGA TGATTTATCT TATAGAGAAG TATTACGACA GGCAAACAGC AATTTTTTGT TCCAAAGTAT TTCAGATTGA AATAGACAGG CAAAGCCAGT CGGCATTTAC CATATTTACC GGCCAGAAAT TACATGGGGA TGAAATGGTA AAGAAAGCGC AGGCTTATAT CGAAAGTAAA CTGGACGAAA AAATATCTGT TGAACATTTG TCAGCCAGCT TCTCGGTTGG CCGCAGGAAC TTTGACAGAA GGTTTATTAA AGCTACAGGG AATACCCCTG TTGAATATGC ACAGCGGGTA AAAATTGAAT CCGCAAAAAA AGCGCTGGAA ACCAGTTGTA AAACAATTAA TGAAGTGATG TATGGCGTAG GCTATTCGGA TGTGAAGGCC TTTCGTGAAG TATTTAGAAA AATCACTGGT ATGTCGCCTT TGGAATACAG GGGCAGATAC AACAAGGAGG CTGCAAGATA A
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Protein sequence | MKHLTIIVPD GENNLSSIVG AYKIFSRANK YWVENGRKEL FKIQLAGISK KVDFYDGLFS VTPHTHISAI TKTNLIIIPS LNHNYLKAIT GNKLLVDWIE QQYKDGAEIA SICTGAFMLA SSGLLDGKSC STHWAAADNF RSMFPKVNLQ TDQLITDENG IYTNGGAYSF LNLMIYLIEK YYDRQTAIFC SKVFQIEIDR QSQSAFTIFT GQKLHGDEMV KKAQAYIESK LDEKISVEHL SASFSVGRRN FDRRFIKATG NTPVEYAQRV KIESAKKALE TSCKTINEVM YGVGYSDVKA FREVFRKITG MSPLEYRGRY NKEAAR
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