| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3735 |
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| Symbol | |
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| ID | 8254867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4457095 |
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| End bp | 4458183 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937397 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003093988 |
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| Protein GI | 255533616 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.532617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA AATACGTCAT TTATGCCCTG ATCGTTTTGG GGATTGCCTA TTTGATTTAC
TACCGGATTT CGGCCAATAA AAAAATTGCC GAAGATGGTG CCGGTCCGGG TAAAGGAAAA
GGAGGATCGT CGAAAGGTTT ACAGGTTGAC GGAATTGTGG TACAGGCCAG CGATTTTACC
AATGATCTTG ATGTAACCGG TACACTGGAA GCAAATGAGG CCGTAGAATT GCGCAGTGAG
GTATCGGGGC TGGTAACCAG CATCAATTTT AAAGAGGGGG CCAATGTAAG CAGGGGCCAG
CTGCTGGTCA AGATCAACGA CCGCGACATA CAGGCACAGC TGCAGGAGGC TTTAACCAAG
CAAAAACTAT CTGCCACCAA TGAAAACCGC TCTAAACAAC TGCTGGAAAA AGGTGCAATC
AGTCAGGAAG AATACGACAC TTCCCTTGCC GACCTCCAGT CTTTAAAGGC ACAGACCCAG
CTGATCCGTG CACAGCTGGC AAAGACTTCC ATTTATGCGC CCTTTAGTGG TAAAATAGGC
TTACGCTCCA TATCCGTGGG CGGTTACCTT ACGCCCAGTA CGCTGATTGC AAATTTATCC
AGCATCAACC CGCTAAAGAT CAGCTTTTCG GTACCGGAAA AATACATTGG CCAGATTAAA
CTGAATTCGG AGATTTCCTT TACGACAGAT GGCTACAACA AAAAATTTAC GGGCAGTGTT
TTTGCAATAG AGCCCGGAAT AAACACACAA ACACGTACTT TACAGATCAA GGCACTGGTG
CCCAATGCGG GCAACGAATT GAGGCCTGGT TCTTTTGCCA AGATAAAGCT GGCCCTTAGC
ACACAAAAAA ATGCGCTGCT CATTCCCAAT GAAGCCATTA TCCCGGTATT GAAAGGAAAG
ACCGTGTTCA TTACCAAAGA CGGCAAAGCC CAACAGGTGC CTGTAGAAGC CGGCACACGC
ACCGCCGATC ACATTGTAAT TACCTCGGGC CTGAACATTG GGGATACTGT ACTGACAACA
GGCGCCATGG CCTTAAAACA GGATGCCCCG GTTAAAGTTT CTGTGGTTAA AAACAAGGCT
GCTTTATGA
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| Protein sequence | MKLKYVIYAL IVLGIAYLIY YRISANKKIA EDGAGPGKGK GGSSKGLQVD GIVVQASDFT
NDLDVTGTLE ANEAVELRSE VSGLVTSINF KEGANVSRGQ LLVKINDRDI QAQLQEALTK
QKLSATNENR SKQLLEKGAI SQEEYDTSLA DLQSLKAQTQ LIRAQLAKTS IYAPFSGKIG
LRSISVGGYL TPSTLIANLS SINPLKISFS VPEKYIGQIK LNSEISFTTD GYNKKFTGSV
FAIEPGINTQ TRTLQIKALV PNAGNELRPG SFAKIKLALS TQKNALLIPN EAIIPVLKGK
TVFITKDGKA QQVPVEAGTR TADHIVITSG LNIGDTVLTT GAMALKQDAP VKVSVVKNKA
AL
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