Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3731 |
Symbol | |
ID | 8254863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4450874 |
End bp | 4452589 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644937393 |
Product | gamma-glutamyltransferase |
Protein accession | YP_003093984 |
Protein GI | 255533612 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAAAA CTATAAGGCT TAAACATTTT GCCCCCCTTG CCGGAGTACT TTTTATAGCA GCTACTTTAG CTGCCTGTGT TGGCGGACAG CTTGGGAAGA ACAACAGTGG AGAATACCGC AACGGAATGG TGGTATCGGC AAATGCAGAA GCCTCGGGGG TAGGATTAAA TATTTTAAAG AAAGGCGGCA ATGCCGTTGA CGCCGCTGTA GCCGTTCAGT TTGCACTGGC CGTGGTATAC CCCAATGCCG GAAATTTAGG TGGTGGCGGT TTTATGGTGT ACCGCTCGGC ATCGGGTGAG ACCAATGCTT TGGATTTCCG CGAAAAAGCT CCCGGACTGG CTTTTAAGGA TATGTATTTA GATGCTGCAG GCAATCCTGT TAAGGAAAAA AGCCTGGATG GACATTTGGC CGCAGGTGTA CCGGGTTCTG TGGCCGGCAT GGTAGAAGCA CATCAAAAAT ATGGTAAATT AAAATGGGCA GAGCTGGTTC AGCCCGCAGT TTTACTGGCC AGGAACGGCT TTAAAATAAC AGCACGTACC GCAAGGGAGC TGAACAGGGA AAAAGAACGC TTTGTAACGT ATAATCCGCT TGGCACAGCC CTGGTAAAAG AAGGGGAATG GGCCGAGGGT GATGTTTTAG TCCAGAATGA GCTGGCAAAT ACCCTGGAAC AGATCAGGGA TAAGGGCCGC GCAGGCTTTT ACGAAGGCCC GGTTGCCGAT AGCCTGGTGG CAGAGATGAA ACGTGGCGCC GGGATCATAT CCGCTGCAGA TTTGAAAAAC TATAAAGCCG TATGGCGCAA GCCCATTGTT GGCAATTACA AAGCCTATAA AATTATCACC ATGCCACCCA CCTCCAGTGG TGGTATTGCT TTGCTTCAAC TGCTGAAATC TGTTGAACCT TACCCTTTAA AACGCTGGGG ATTAAATTCA GATTCGACGG TACAGGTGAT GGTTGAAGCA GAAAGGAGAG TATATGCCGA TCGTGCAACG CATTTAGGCG ATCCGGATTT CTTTAAAGTG CCCCAGAAAC AACTGATCGA TCCTGCATAT ATCAAAAGCA GGATGTCAAA CTTTAACTGG GCACAGGCCA GCTTAAGCTC GGACATTAAA GCCGGTGTAT TTAATGTACC TGAACATGAA GAGACCACCC ATTTTTCTAT TGTAGACAGG GATGGCAATG CTGTTTCGTT AACCACAACC CTAAATGGTT CTTATGGTTC TGCAGTGGTG GTAAAAGGAG CGGGCTTTTT ATTGAACAAT GAAATGGACG ACTTTTCTGT AAAACCGGGG GCACCAAATA TGTACGGTTT ATTGGGCGGC GAAGCAAACG CCATTGTACC AGAGAAAAGG ATGCTGAGTT CGATGACGCC AACCATAATA GAAAAGGACG GTAAACTATT TATGGTAGTG GGCACCCCGG GTGGCTCTAC CATTATGACC TCTGTTTTTC AGACCATCAT CAATGTCATA GAATTTGACA AAAGTATGCA GTCGGCCGTT ACCGCAAAGC GGTTCCACCA CCAATGGATG CCTGATTCTG TATATGTGGA AAAAGGGACG CTGGACAGTG CAGCTGTATT GGAGCTGACC AAAAGAGGCT ATCACCTTAA GCCAAGAGGG CCTATTGGCC GGGTTGATGC GATATTGAAA ACCAAATGGG GTTATTATCA GGGTGGGGCT GATCCCCGTG GGGATGATAA AGCAATGGGC TGGTAG
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Protein sequence | MQKTIRLKHF APLAGVLFIA ATLAACVGGQ LGKNNSGEYR NGMVVSANAE ASGVGLNILK KGGNAVDAAV AVQFALAVVY PNAGNLGGGG FMVYRSASGE TNALDFREKA PGLAFKDMYL DAAGNPVKEK SLDGHLAAGV PGSVAGMVEA HQKYGKLKWA ELVQPAVLLA RNGFKITART ARELNREKER FVTYNPLGTA LVKEGEWAEG DVLVQNELAN TLEQIRDKGR AGFYEGPVAD SLVAEMKRGA GIISAADLKN YKAVWRKPIV GNYKAYKIIT MPPTSSGGIA LLQLLKSVEP YPLKRWGLNS DSTVQVMVEA ERRVYADRAT HLGDPDFFKV PQKQLIDPAY IKSRMSNFNW AQASLSSDIK AGVFNVPEHE ETTHFSIVDR DGNAVSLTTT LNGSYGSAVV VKGAGFLLNN EMDDFSVKPG APNMYGLLGG EANAIVPEKR MLSSMTPTII EKDGKLFMVV GTPGGSTIMT SVFQTIINVI EFDKSMQSAV TAKRFHHQWM PDSVYVEKGT LDSAAVLELT KRGYHLKPRG PIGRVDAILK TKWGYYQGGA DPRGDDKAMG W
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