Gene Phep_3731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3731 
Symbol 
ID8254863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4450874 
End bp4452589 
Gene Length1716 bp 
Protein Length571 aa 
Translation table11 
GC content48% 
IMG OID644937393 
Productgamma-glutamyltransferase 
Protein accessionYP_003093984 
Protein GI255533612 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0405] Gamma-glutamyltransferase 
TIGRFAM ID[TIGR00066] gamma-glutamyltranspeptidase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAA CTATAAGGCT TAAACATTTT GCCCCCCTTG CCGGAGTACT TTTTATAGCA 
GCTACTTTAG CTGCCTGTGT TGGCGGACAG CTTGGGAAGA ACAACAGTGG AGAATACCGC
AACGGAATGG TGGTATCGGC AAATGCAGAA GCCTCGGGGG TAGGATTAAA TATTTTAAAG
AAAGGCGGCA ATGCCGTTGA CGCCGCTGTA GCCGTTCAGT TTGCACTGGC CGTGGTATAC
CCCAATGCCG GAAATTTAGG TGGTGGCGGT TTTATGGTGT ACCGCTCGGC ATCGGGTGAG
ACCAATGCTT TGGATTTCCG CGAAAAAGCT CCCGGACTGG CTTTTAAGGA TATGTATTTA
GATGCTGCAG GCAATCCTGT TAAGGAAAAA AGCCTGGATG GACATTTGGC CGCAGGTGTA
CCGGGTTCTG TGGCCGGCAT GGTAGAAGCA CATCAAAAAT ATGGTAAATT AAAATGGGCA
GAGCTGGTTC AGCCCGCAGT TTTACTGGCC AGGAACGGCT TTAAAATAAC AGCACGTACC
GCAAGGGAGC TGAACAGGGA AAAAGAACGC TTTGTAACGT ATAATCCGCT TGGCACAGCC
CTGGTAAAAG AAGGGGAATG GGCCGAGGGT GATGTTTTAG TCCAGAATGA GCTGGCAAAT
ACCCTGGAAC AGATCAGGGA TAAGGGCCGC GCAGGCTTTT ACGAAGGCCC GGTTGCCGAT
AGCCTGGTGG CAGAGATGAA ACGTGGCGCC GGGATCATAT CCGCTGCAGA TTTGAAAAAC
TATAAAGCCG TATGGCGCAA GCCCATTGTT GGCAATTACA AAGCCTATAA AATTATCACC
ATGCCACCCA CCTCCAGTGG TGGTATTGCT TTGCTTCAAC TGCTGAAATC TGTTGAACCT
TACCCTTTAA AACGCTGGGG ATTAAATTCA GATTCGACGG TACAGGTGAT GGTTGAAGCA
GAAAGGAGAG TATATGCCGA TCGTGCAACG CATTTAGGCG ATCCGGATTT CTTTAAAGTG
CCCCAGAAAC AACTGATCGA TCCTGCATAT ATCAAAAGCA GGATGTCAAA CTTTAACTGG
GCACAGGCCA GCTTAAGCTC GGACATTAAA GCCGGTGTAT TTAATGTACC TGAACATGAA
GAGACCACCC ATTTTTCTAT TGTAGACAGG GATGGCAATG CTGTTTCGTT AACCACAACC
CTAAATGGTT CTTATGGTTC TGCAGTGGTG GTAAAAGGAG CGGGCTTTTT ATTGAACAAT
GAAATGGACG ACTTTTCTGT AAAACCGGGG GCACCAAATA TGTACGGTTT ATTGGGCGGC
GAAGCAAACG CCATTGTACC AGAGAAAAGG ATGCTGAGTT CGATGACGCC AACCATAATA
GAAAAGGACG GTAAACTATT TATGGTAGTG GGCACCCCGG GTGGCTCTAC CATTATGACC
TCTGTTTTTC AGACCATCAT CAATGTCATA GAATTTGACA AAAGTATGCA GTCGGCCGTT
ACCGCAAAGC GGTTCCACCA CCAATGGATG CCTGATTCTG TATATGTGGA AAAAGGGACG
CTGGACAGTG CAGCTGTATT GGAGCTGACC AAAAGAGGCT ATCACCTTAA GCCAAGAGGG
CCTATTGGCC GGGTTGATGC GATATTGAAA ACCAAATGGG GTTATTATCA GGGTGGGGCT
GATCCCCGTG GGGATGATAA AGCAATGGGC TGGTAG
 
Protein sequence
MQKTIRLKHF APLAGVLFIA ATLAACVGGQ LGKNNSGEYR NGMVVSANAE ASGVGLNILK 
KGGNAVDAAV AVQFALAVVY PNAGNLGGGG FMVYRSASGE TNALDFREKA PGLAFKDMYL
DAAGNPVKEK SLDGHLAAGV PGSVAGMVEA HQKYGKLKWA ELVQPAVLLA RNGFKITART
ARELNREKER FVTYNPLGTA LVKEGEWAEG DVLVQNELAN TLEQIRDKGR AGFYEGPVAD
SLVAEMKRGA GIISAADLKN YKAVWRKPIV GNYKAYKIIT MPPTSSGGIA LLQLLKSVEP
YPLKRWGLNS DSTVQVMVEA ERRVYADRAT HLGDPDFFKV PQKQLIDPAY IKSRMSNFNW
AQASLSSDIK AGVFNVPEHE ETTHFSIVDR DGNAVSLTTT LNGSYGSAVV VKGAGFLLNN
EMDDFSVKPG APNMYGLLGG EANAIVPEKR MLSSMTPTII EKDGKLFMVV GTPGGSTIMT
SVFQTIINVI EFDKSMQSAV TAKRFHHQWM PDSVYVEKGT LDSAAVLELT KRGYHLKPRG
PIGRVDAILK TKWGYYQGGA DPRGDDKAMG W