Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3710 |
Symbol | |
ID | 8254842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4424331 |
End bp | 4425734 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937372 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_003093963 |
Protein GI | 255533591 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATACG ATGTAGTTGT AATTGGCTCG GGCCCGGGCG GTTATGTTGG AGCAATCAGA TGTGCCCAGT TAGGCTTAAA AACAGCAGTT ATAGAGAAAT ATAAAACTTT TGGGGGAACC TGTTTAAATG TAGGATGTAT TCCTTCCAAG GCCCTGTTGG ATTCTTCAGA GCATTTTCAT AATGCTGCAC ATACTTTTCA GACGCATGGC ATTAATCTGA AAGATTTAAA GGTGGATATG CCGCAAATGA TTGCCCGTAA AAATGATGTG GTGGCGCAAA ATACTGCTGG GATACAATAT TTGTTTAAAA AGAATAAAAT TGATGCTTTT GAGGGTGTAG GTTCTTTTAT AGATAAAAAT ACGATTAAGA TTACCAAAGA TGGTAAATCG GAGACCATAA CAGCTAAAAA TGTAATCATT GCGTCGGGTT CAAAACCTAC TGCATTGCCT TTTTTACCTG TTGATAAAAA ACGGATCATC ACTTCTACAG AAGCTTTAAA CATCACTGAG GTACCTAAGC AGATGGTAGT TATTGGCGGT GGTGTAATTG GACTGGAACT AGGTTCGGTA TATGCACGTT TAGGTACAAA AGTATCGGTG ATTGAATTTA TGCCATCAAT TATAGGTACC ATGGATGCCG GTCTAGGTAA AGAACTGCAG CGTGTATTGA AAAAATCGCT TGGTATGGAG TTTTTTATGG GCCATAAAGT TACCGGGGCA AGTACCAAGG GCAAGAAAGT TACGGTTACA GCAACCAATG CCAAAGGAGA AGAGGTGAAA TTTGAAGCAG ATTATTGCAT TGTTGCAGTT GGGCGTACAG CTTATACAGA AGGATTGGGG CTGGAAAACA TAGGTATCAA ACCTGAAGAA AGAGGAAATA AAATCCCGGT GAACGATCAC CTGGAAACGA CAGTCCCGGG TGTGTATGCG ATAGGTGATG TGATTAAGGG TGCTATGCTT GCCCATAAGG CCGAAGATGA GGGCGTATAT GTTGCAGAGC GGATTGCGGG ACAAAAACCA CACATCAATT ATAACCTGAT TCCGGGCGTG GTTTATACCT GGCCGGAAGT AGCTTCGGTA GGCTATACCG AAGAGCAGCT GAAAGAAAAA GGACTATCAT ACAAAACAGG TTCCTTTCCA TTTAAGGCCA GTGGCCGTGC CAAGGCAAGT ATGGATACAG ATGGCTTTGT AAAAGTACTT GCAGATGCTA AAACAGATGA AATTTTAGGT GTACACATGA TTGGACCAAG GGCTGCAGAT ATGATTGCAG AGGCTGTTGT TGCTATGGAA TTCCGTGCCT CAGCAGAAGA CATTGCCAGG ATCTGTCATG CACACCCTAC TTATACAGAG GCGATGAAAG AGGCTGCTAT GGCAGCGACA GAGAACCGGG CCATCCACAT TTGA
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Protein sequence | MQYDVVVIGS GPGGYVGAIR CAQLGLKTAV IEKYKTFGGT CLNVGCIPSK ALLDSSEHFH NAAHTFQTHG INLKDLKVDM PQMIARKNDV VAQNTAGIQY LFKKNKIDAF EGVGSFIDKN TIKITKDGKS ETITAKNVII ASGSKPTALP FLPVDKKRII TSTEALNITE VPKQMVVIGG GVIGLELGSV YARLGTKVSV IEFMPSIIGT MDAGLGKELQ RVLKKSLGME FFMGHKVTGA STKGKKVTVT ATNAKGEEVK FEADYCIVAV GRTAYTEGLG LENIGIKPEE RGNKIPVNDH LETTVPGVYA IGDVIKGAML AHKAEDEGVY VAERIAGQKP HINYNLIPGV VYTWPEVASV GYTEEQLKEK GLSYKTGSFP FKASGRAKAS MDTDGFVKVL ADAKTDEILG VHMIGPRAAD MIAEAVVAME FRASAEDIAR ICHAHPTYTE AMKEAAMAAT ENRAIHI
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