| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3707 |
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| Symbol | |
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| ID | 8254839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4419116 |
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| End bp | 4420180 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937369 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003093960 |
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| Protein GI | 255533588 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA TAATCATAGC AGTCCTGATC ATCATAGTTG CCGGAGGAGG AATTGCCCTG
GTGTTAAGCA ACAATAAGAA AAAGAATGCA GCTAAAACTG CAATTGTTGC AGCAGGTGGA
GGTGCAGTGA GTGTACGTAC TGCAACGATC AAAAAAGCCC CCATTGACCT TGATTTTAGC
GTTAACGGAA CGTTTGCCCC CAATCAGGAG TTAAACTTCC TTTCAGAAAA TGCAGGTCGC
GTTACTAAAA TATTTGTGGA AGAAGGTTCC AGAGTGAGTA AAGGCCAGAT TTTAGCACGT
ATTGATGCCG AGATCATAAA TACGGACAAA GAAACAGCCG AAGCAAATTT ACAAAATGCC
ATCAGGGATG AAGCCAGGTA TGCAAGCTCG TTTAAAACTG GTGGAGTTAC GCAACAACAG
CTGGATCAGG CTAAACTGGC AGTAGAAAAT GCACGTTTAA GGTTGCAAAG CGCTACAAGA
AAAGTAAGTG ATGCCAACAT AAAATCGCCA ATCAACGGTA TAGTCAATAA AAAATATATT
GAAGTAGGTG CATTTGTAAA TGCACAGGGA ACACAAATGT TTGAACTGGT TGACGTTTCC
AAACTAAAAC TGAAGGTAAA CGTAAATGAA AGCCAGGTAG CCAGCTTAAA AATCGGCGAC
AAGGTACAGA TAAAATCCAA TGTTTTTCCT GCCGATGATT ATACCGGAAC CATTACTTTT
ATTGCCGCTA AGGCCGACAA TTCCCTGAAC TTCCCAATTG AAATTCAGGT AGAAAACAAC
GGTAAGCACG ACATTAAAGC CGGTATGTAT GGAACAGCCA TTTTTAAGTT CCCAAAACAG
GCGCCTATCC TGACCATCCC ACGTGGCTCA TTTGTAGGCA GTGTAAGCAG CAATCAGATT
TTTGTATTGG AAAATGGAAA TACAGCCAGG CTTCGTAAAG TTATTGCAGG CAGAATTATT
GGTGACAATG TTGAGGTCAT TCAAGGTTTG CAAGAAGGAG AAACTGTAAT CACAAGCGGA
CAAATCAATC TGGTAGACGG CAGTGCCGTA GCACCAGTAA AATAA
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| Protein sequence | MKRIIIAVLI IIVAGGGIAL VLSNNKKKNA AKTAIVAAGG GAVSVRTATI KKAPIDLDFS
VNGTFAPNQE LNFLSENAGR VTKIFVEEGS RVSKGQILAR IDAEIINTDK ETAEANLQNA
IRDEARYASS FKTGGVTQQQ LDQAKLAVEN ARLRLQSATR KVSDANIKSP INGIVNKKYI
EVGAFVNAQG TQMFELVDVS KLKLKVNVNE SQVASLKIGD KVQIKSNVFP ADDYTGTITF
IAAKADNSLN FPIEIQVENN GKHDIKAGMY GTAIFKFPKQ APILTIPRGS FVGSVSSNQI
FVLENGNTAR LRKVIAGRII GDNVEVIQGL QEGETVITSG QINLVDGSAV APVK
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