| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3706 |
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| Symbol | |
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| ID | 8254838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4417776 |
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| End bp | 4419119 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644937368 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003093959 |
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| Protein GI | 255533587 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAA TAATTAAACA GATAAAAGTA ATTCCGGTAT TGCTACTCGG GTTATTGCTA
TCAAATACAG TTAACGCTCA GCAAACCATG ACGTTAAAGG AAGCATTGAA TTATGCAGTA
CAGAACAGTG TGAAGACACG AAAATCCAAA CTGGACATTG ATGGCGGAAA GTATAAAACA
GAGGAAATCA GAGCTCAGGC CCTGCCACAA ATTACAGGTA ATGCAGGCTT AACTTATAAT
CCTATTATTG GCCAGCTGGT AGCAAATATA GGTGGTCAGA CCCAATCATT TAAATTGGGC
CAGAACTGGA ATTCTTCTGC CGGTGTACAG CTTTCACAAC AACTGTTCAA TCAAACAGTA
TTTACCGGGC TTCAGGCAGC AAAATCCAGT GAAGAGTATT ATAATCTCGT TTCTCAACTT
ACTGAAGAGC AAATTATTGA ATTGGTTGCC AACAATTACT ATCAGGTTTT AGTAAACAGA
CAACAATTGA ATGTGGTAGA CAACAACATC AAAAATGTAA AAGTTATTGA AAAAATCATT
TCTAATCAGT ATCAGAATGG CTTGGCAAAA AAGATCGATG TAGACCGTAT TAAAGTAAAC
CTTACCAATT TAGAGACACA GCGTGAACAA ACTTTAAATT TAATCACACA ATTGGAAAAC
CAGTTGAAAT TCTCTATGGG GATGCCGGTA AGTACTGACA TCACTTTACC TAAAACAGAA
CTTACAGAGG TTACCCGATT ACCACAGTTC GCAGACTCTC TTTCGCTGGC CAATAGAACT
GAAATCAAAA TTTTGGATAC TCAGGACAAA CTATACTGGC TACAACGTAA AGCTTATGTA
TCAGAATACT ACCCCTCTTT AGCTTTGACA GGAAACTATA CCTATTCCAG CCAGAGCGGT
AGTTTCGACT TCCTAAGCTC CAACAATACT GCCATAGGTT TTGGCTCCTC TGCTGTCGGC
CTTACTTTAA AAGTGCCTAT TTTTAATGGC TTTCTGACCC GTTCAAAAAT TCGCCAGGCT
GATATCGATA TTAAAAAAGC AAGAGAAGAC AGAAGAGAAT CAACAAATTC ACTGAATTTG
GCTTATGAAA ATGCAAAAAT CCAGTTACGC AACAGTTTAA ATACCATTAA TGCACAAAAG
AAAAATGCTG AACTGGCCGA CGAGATCTAT AGAAGTACAC AAAACAACTA TAACAATGGC
CTCGCAAACT TAACAGATCT GCTGGACACA GAGAACGCAT TAACAGAAGC ACAAAACAGC
TATACGCAGG CATTATTAAA CTATAAGATT GCCGAAATAC AATTAATCAA ATCAAACGGA
AATATAAAAT CACTTTTACA ATGA
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| Protein sequence | MNTIIKQIKV IPVLLLGLLL SNTVNAQQTM TLKEALNYAV QNSVKTRKSK LDIDGGKYKT
EEIRAQALPQ ITGNAGLTYN PIIGQLVANI GGQTQSFKLG QNWNSSAGVQ LSQQLFNQTV
FTGLQAAKSS EEYYNLVSQL TEEQIIELVA NNYYQVLVNR QQLNVVDNNI KNVKVIEKII
SNQYQNGLAK KIDVDRIKVN LTNLETQREQ TLNLITQLEN QLKFSMGMPV STDITLPKTE
LTEVTRLPQF ADSLSLANRT EIKILDTQDK LYWLQRKAYV SEYYPSLALT GNYTYSSQSG
SFDFLSSNNT AIGFGSSAVG LTLKVPIFNG FLTRSKIRQA DIDIKKARED RRESTNSLNL
AYENAKIQLR NSLNTINAQK KNAELADEIY RSTQNNYNNG LANLTDLLDT ENALTEAQNS
YTQALLNYKI AEIQLIKSNG NIKSLLQ
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