Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3695 |
Symbol | |
ID | 8254826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4410026 |
End bp | 4410922 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937356 |
Product | fatty acid hydroxylase |
Protein accession | YP_003093948 |
Protein GI | 255533576 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00011612 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAT TAGATCAAGG TATAACCGTT GGGGCATTGT TTGGCTTTGT CATATTGCTT ACCTTATTCG AAATGTATTT TAGTTACGCC CATGATAGAA AACACTATCA TGGGCGTGAT ACCCTTACCA ATATCTATTT GATGATTGCA GCATTTGTAA TCAATGTGCT AACCAAAGCA GGCACATTTA TGCTGCTGGA TTATGTTTAC CATCATTACA GGCTTTTCCA GGTCAAGAAC ATTTACCTAT ACTGGCTTGT ATTGATCCTG GCACAAGACC TGCTTTACTG GCTGCTGCAC TATACCGGCC ACTATGTGCG TTTTTTTTGG GCCATGCACG TTACCCATCA CTCTTCCCCC TATTTTAACC TCACAACAGG GTTCCGTTCT ACTGTTTTCG AACCCTTATA CCGGGTGTTT TTTTATTTGC CACTTGCCTT TATGGGCTTT AGTGCCATGG ATATTTTATT TGCCTACCTG GTTACCCAGA TTTACGGTAA TCTGGTGCAT ACCCAAACCA TAGGCAAGTT GCAGCCCTGG TTCGAATATA TCTTTGTAAC ACCATCACAC CATCGGGTCC ATCACGCCAG TAACCTGAGG TACCTGGACA AAAATATGGG TATGGTGCTT ATTTTATGGG ACCGACTTTT CGGCACTTTT CAGGAAGAAG TTCCGGAAGA AGAGATTGTA TATGGCTTAA CCAAACAGCC TGAAGACACG GGGGCTGTAA ATATCATTTT TCATGAATTC AAGGCCTTAA TCGCCGACGC AAAGAAAGCT CCTGATTTTA AGGATAAGGT AAAATATTTT TTATACCCAC CAGGATGGAG CCATGATGGC AGCAGCCAGA CAGCCAAAAC AATGCAACGT GAAATGAAAC AGCAGAAAGT GGCTTAA
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Protein sequence | MNELDQGITV GALFGFVILL TLFEMYFSYA HDRKHYHGRD TLTNIYLMIA AFVINVLTKA GTFMLLDYVY HHYRLFQVKN IYLYWLVLIL AQDLLYWLLH YTGHYVRFFW AMHVTHHSSP YFNLTTGFRS TVFEPLYRVF FYLPLAFMGF SAMDILFAYL VTQIYGNLVH TQTIGKLQPW FEYIFVTPSH HRVHHASNLR YLDKNMGMVL ILWDRLFGTF QEEVPEEEIV YGLTKQPEDT GAVNIIFHEF KALIADAKKA PDFKDKVKYF LYPPGWSHDG SSQTAKTMQR EMKQQKVA
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