Gene Phep_3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3686 
Symbol 
ID8254817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4399941 
End bp4400369 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content41% 
IMG OID644937347 
ProductCBS domain containing protein 
Protein accessionYP_003093939 
Protein GI255533567 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.364538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG TACAGCAGTT ACTCAGCACC AAATCAGCCC AAATTTTCTC TGTAACAGAA 
AACTCATCAG TTTTAGATGC CTTAAAAGTA ATGATGGAAA AAAACATTAG TGCCTTGATG
GTTCTTGACG GTAAGCGCCT AGTAGGAATT TTTACAGAGC GGGATTATGC AAGAAAAATT
ATCCTGCACG GAAAGTCTTC GGCTGAAACT GCTATAAAAG AAGTCATGAC TGCCCAGCCC
ATCACAGTAC TTCCATCCGA TGGCATAGAC TTTTGTATGG GTATTATGAC AGATAAACAC
ATCAGACACT TACCTGTAAT GCAGGAGCAG CAGCTTTTGG GTATGGTATC CATAGGTGAT
GTGGTAAAGT TTATTATTGA AGACCAGAAG CAAACCATTT CCCAGCTGGA GAGCTATATC
AGCAGTTAA
 
Protein sequence
MKTVQQLLST KSAQIFSVTE NSSVLDALKV MMEKNISALM VLDGKRLVGI FTERDYARKI 
ILHGKSSAET AIKEVMTAQP ITVLPSDGID FCMGIMTDKH IRHLPVMQEQ QLLGMVSIGD
VVKFIIEDQK QTISQLESYI SS