| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3670 |
|---|
| Symbol | |
|---|
| ID | 8254801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 4381846 |
|---|
| End bp | 4382775 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644937331 |
|---|
| Product | protein of unknown function UPF0187 |
|---|
| Protein accession | YP_003093923 |
|---|
| Protein GI | 255533551 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3781] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTAA AAGAAAATAT ACCGGTAAAA TATATCTTTG GAAAGATTGG TAAGGAAATG
CTGATCGTTG CGCTATACGC TGCCTTAATC ACCATGTTAT ACAGCAATTT TCACATTACC
AGAATTTCCA TACCTATTGC AGTGCCCACT ATTCTGGGTA CTGTAATTTC ATTGCTGCTG
GCTTTTAAAT CCAACCAGGC ATACGATCGC TGGTGGGAAG CCCGTACCAT CTGGGGTGCA
GTCGTAAATG ATTCCAGATC GCTGACAAGG CAGTTGCTTA CCTTTGTCGA CAATCCATAT
AGTGCCGAAG ATGAGAAAGT CTTTTGCGAA CGTCTTGCAA AAAGACAGAT TGCCTGGTGC
TACGCCCTTA GCCGGCACCT GCGCAAACAA GATCCACTGG AAGAGCTTGG CCGGCTCATT
AGTAATGATG ATCTGGAGTA TGTAAAAAAC TATACCAACG TACCCCTGGC ACTGCTGGAG
CTGCAGGGCA GCGATTTGCG CAATGCCTAT AAGCTGGGCT GGATAAATGA ATACCAGCAG
GTACAGATGG ATAAGACGCT TACGGCCTTT TCTAATCAAA TGGGCGGTTG CGAACGCATA
AAGAATACAA TTTTTCCGGT GACGTATAGT GTTTATATTC ATTTCTCCAT CATCCTCTTC
ATCATGTTGC TGCCCTTCGG ATTGATAGAG TTTTTCAGCT TTGCGACAGT TCCACTGGTT
ATTGCCATCG CCTGTTCTTT TTTTCTGATC GAAAAAATGG CCATTCATTT ACAGGACCCT
TTTGAGAATA AACCAACAGA TACACCTACA ACCACCATTT GCCGGACTAT TGAAAGGGAC
ATTAAACAGA TGCTCAAAGA AAATTACAGG CAGGAAGAAA AGCTGACAGG CTTGCATCTT
ACCAAGGCAA AAATGTATTA TATCCTTTAG
|
|---|
| Protein sequence | MLLKENIPVK YIFGKIGKEM LIVALYAALI TMLYSNFHIT RISIPIAVPT ILGTVISLLL
AFKSNQAYDR WWEARTIWGA VVNDSRSLTR QLLTFVDNPY SAEDEKVFCE RLAKRQIAWC
YALSRHLRKQ DPLEELGRLI SNDDLEYVKN YTNVPLALLE LQGSDLRNAY KLGWINEYQQ
VQMDKTLTAF SNQMGGCERI KNTIFPVTYS VYIHFSIILF IMLLPFGLIE FFSFATVPLV
IAIACSFFLI EKMAIHLQDP FENKPTDTPT TTICRTIERD IKQMLKENYR QEEKLTGLHL
TKAKMYYIL
|
|---|
| |