| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3586 |
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| Symbol | |
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| ID | 8254708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4269002 |
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| End bp | 4269886 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644937238 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003093839 |
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| Protein GI | 255533467 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.700608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGATT TTATTGAACA AGTATTAAAA GCTACAACTT CTACAATCAC ATTGGCAGAA
GGAAGCGCTT ATCATGCACT GAACAACTTC CACAATCATC AGGAAATAGA ACTCGTTTAT
GTTAGGTCGG GTGAAGGGAC TTTCTCCATA GGGCATACCT CAAAAAGGAT TTCAAGCGGC
GCGATGATTC TGATAGGTAC AAATATCCCG CACATGTTCA AATTTGAAAG CAACAGATAT
TATGATTATG CCATGAAACA CGCAAAAAGA ATTGTTCCAC TGCAATTGTT AACCCTGCAT
TTTGATCCTT ATAAACTAGG GAATGATTTC TTGAAGCTTC CTGAAAATAT CGTTATCAAA
GACCTGCTTG ATAAAGCAAA GAAAGGTCTT TTAATTCCTG AACAAACAAA ACTGGCTGTG
ATTGAATATT TAAAAAAAAT CGAATCATCC CTTCATTACG AGCAGCTACC TTTAGTCTTA
CAGCTCTTAA ACAAAATTGG TGTATCTGAA GAAATAGTGG GCCTATCAGC TTACAATGAA
AAAAAAACTT TTAAAAAAAT AGATGAAACC AGGTTAACCA TGGTTTATCT ATATACAATG
GATAATTTTT ATAAAGAAAT CAAGCTGGAA CAAATTGCCA ATGTAATCCA TATGGTCCCT
AATGCATTTT GTCACTATTT TAAATCACGT ACCGGCAGAA CTTACTTCGA TTTTTTGATT
GCGGTAAGAA TCGAACATGC CTGTAAATTG TTAAGGGAAA GCAACGACAG TGTAAATTCA
GTTTGCCGCG ACTCAGGTTT TAGTAATTTA TCAAACTTTA ACAGATACTT TAAATTGCAA
ACCGAAAAAT CGCCTTTAGA ATATCGGCGG AGTTTTAGAA ATTAA
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| Protein sequence | MKDFIEQVLK ATTSTITLAE GSAYHALNNF HNHQEIELVY VRSGEGTFSI GHTSKRISSG
AMILIGTNIP HMFKFESNRY YDYAMKHAKR IVPLQLLTLH FDPYKLGNDF LKLPENIVIK
DLLDKAKKGL LIPEQTKLAV IEYLKKIESS LHYEQLPLVL QLLNKIGVSE EIVGLSAYNE
KKTFKKIDET RLTMVYLYTM DNFYKEIKLE QIANVIHMVP NAFCHYFKSR TGRTYFDFLI
AVRIEHACKL LRESNDSVNS VCRDSGFSNL SNFNRYFKLQ TEKSPLEYRR SFRN
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