| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3457 |
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| Symbol | |
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| ID | 8254577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4110259 |
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| End bp | 4110876 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937109 |
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| Product | RDD domain containing protein |
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| Protein accession | YP_003093712 |
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| Protein GI | 255533340 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1714] Predicted membrane protein/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.052067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGATCCCA ACGATAGTGA ATATACTGTA GTCATCAATG GAAAGCCTGA GGGGCCGTAT
AGGCTAGATC AGTTAAAAAT ATTGCACATT GAGACCGGAA CTTTTATCAG AAAGCCGGGT
ATGGACGATT ATAAAGAAGC GCACGAGTTC CCGGAACTGC GTGCGCTTCT TGGGTTTACC
TATCAACAAA CCGCACCGCA GTATTTTGCT GCTTTCGATC AGCGGCTGCT GGCCTGTGTA
ATTGATTATT TTTTTATATT CACGGCATAC GTGCTGCTGA TCCTGGTCAG TTTTATTTTT
GTGGAAGAAA AAACCCAGCG CATCATGATA GCCCTGTCGG GAAGCCCTTT AATTCTGGTT
GCTAAATTCT TTTATGGCAG CATTACCGAG GCTTCTGAAA AACAGGCCGG ACTTGGAAAA
CGCCTGATGA ATATCAGGGT GACAGATTTA AATGGTAATC GCATCAGCTT AAACAGAGCT
TATGCCCGCA ACCTGGCTAA ATTATTGTCA ACAGCCCCTT TCTTTTTTGG ATACCTTTAT
AGTTTCCTGA ATAAAAAACT ACAGTGTTTT CACGATATCG TATCGGATAC TCTGGTGATA
AAGGACAGGC TCATATAA
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| Protein sequence | MDPNDSEYTV VINGKPEGPY RLDQLKILHI ETGTFIRKPG MDDYKEAHEF PELRALLGFT
YQQTAPQYFA AFDQRLLACV IDYFFIFTAY VLLILVSFIF VEEKTQRIMI ALSGSPLILV
AKFFYGSITE ASEKQAGLGK RLMNIRVTDL NGNRISLNRA YARNLAKLLS TAPFFFGYLY
SFLNKKLQCF HDIVSDTLVI KDRLI
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