| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3415 |
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| Symbol | |
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| ID | 8254535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4067497 |
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| End bp | 4068999 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937068 |
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| Product | ATP synthase F1, beta subunit |
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| Protein accession | YP_003093671 |
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| Protein GI | 255533299 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAACA TTGGAAAAAT AGCGCAGATT ATAGGACCGG TAGTTGACGT GAGTTTTGCT
GACGATGCTC ATTTACCTCA AATTTTCTCT GCATTAGAGA TTGAAAAAGA AAACGGACAG
AAGATCGTTT TAGAAGTTCA ACAACATCTT GGTGAAGACC GCGTACGTGC AATTGCAATG
GACTCGACCG ATGGTTTAGT TCGTGGAATG AAAGCACTGG ACACTGGTGC CCCTATCAAA
ATGCCGGTTG GCGACCAGAT TAAAGGTCGC TTATTCAATG TTGTTGGTGA AGCTATTGAC
GGGATCAATG CAGTCGACAA AACTGGTGGT CGTCCTATTC ACAACACTCC TCCGAGATTT
GAGGATCTTT CAACCGAAAC TGAAGTACTG TTTACCGGTA TTAAAGTAAT CGACTTATTA
GAGCCTTATG CCAAAGGTGG TAAAATTGGT TTGTTCGGTG GTGCGGGTGT AGGTAAAACC
GTATTGATCA TGGAGCTGGT AAACAACATT GCGAAAGCTT ATGCTGGTTT ATCGGTATTT
GCCGGTGTGG GTGAGCGTAC ACGTGAAGGT AACGACCTTT TACGTGAGTT TATCGAATCT
GGTGTAATCA ACTATGGTGA TGAGTTCCTT CATTCTATGG AAAAAGGCGG ATGGGATTTG
AAAACGGTTG ATACAGATAA ATTAAAAGAA TCTAAAGCAA CATTGGTATT TGGTCAGATG
AACGAGCCTC CAGGTGCACG TGCACGTGTG GCCTTATCAG GATTGACCGT TGCTGAATAT
TTCCGTGATG GTGATGGTGA AGGCGCAGGA AAAGATATCC TTTTCTTCGT TGACAACATC
TTCCGTTTCA CCCAGGCAGG TTCTGAGGTA TCGGCCCTAT TGGGACGTAT GCCTTCGGCC
GTAGGTTACC AGCCAACACT GGCAACAGAG ATGGGTCTGA TGCAGGAGCG TATCACTTCA
ACAAAGCGCG GTTCCATTAC ATCTGTACAG GCCGTTTATG TACCTGCGGA TGATTTAACT
GACCCCGCTC CGGCTACAAC ATTTGCCCAC TTGGATGCAA CTACTGTATT GTCACGTAAA
ATTGCCGAGC TAGGTATCTA TCCTGCAGTG GATCCACTGG ATTCTACTTC AAGGATCCTT
TCTCCTGCTA TTTTGGGTGA TGAGCATTAC AATACTGCCC AACGCGTAAA AGAAACTTTA
CAACGTTATA AAGAATTGCA GGATATCATC GCCATCTTAG GTATGGACGA GTTATCTGAA
GAAGATAAAC TGGTTGTATC CCGCGCACGT CGCGTTCAGC GTTTCTTGTC TCAGCCTTTC
CACGTAGCCG AACAATTTAC AGGATTAAAA GGTGTATTGG TTGACATTAA AGATACCATC
AAAGGATTTA ACATGATCAT GGATGGTGAA GTTGATGAAT ATCCTGAAGC TGCATTTAAC
CTTGTAGGTA GCATCGAAGA AGCTATTGAA AAAGGTAAGA AATTATTAGC TGAAGCGAAC
TAG
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| Protein sequence | MPNIGKIAQI IGPVVDVSFA DDAHLPQIFS ALEIEKENGQ KIVLEVQQHL GEDRVRAIAM
DSTDGLVRGM KALDTGAPIK MPVGDQIKGR LFNVVGEAID GINAVDKTGG RPIHNTPPRF
EDLSTETEVL FTGIKVIDLL EPYAKGGKIG LFGGAGVGKT VLIMELVNNI AKAYAGLSVF
AGVGERTREG NDLLREFIES GVINYGDEFL HSMEKGGWDL KTVDTDKLKE SKATLVFGQM
NEPPGARARV ALSGLTVAEY FRDGDGEGAG KDILFFVDNI FRFTQAGSEV SALLGRMPSA
VGYQPTLATE MGLMQERITS TKRGSITSVQ AVYVPADDLT DPAPATTFAH LDATTVLSRK
IAELGIYPAV DPLDSTSRIL SPAILGDEHY NTAQRVKETL QRYKELQDII AILGMDELSE
EDKLVVSRAR RVQRFLSQPF HVAEQFTGLK GVLVDIKDTI KGFNMIMDGE VDEYPEAAFN
LVGSIEEAIE KGKKLLAEAN
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