Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3414 |
Symbol | |
ID | 8254534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4066367 |
End bp | 4067278 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644937067 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_003093670 |
Protein GI | 255533298 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACAG TATTAGTTAC AGGAAGCAAC GGGCTTTTAG GCCAGAAAAT TACAGAACGT CTGTTGGTTA CCAACCAATT TGGCTTAATT GCGACAGCAA AGGGGGGCAA TCGTTTTCCT GTTACCGAAG GGTATACTTA CGCCGAAATG GATATTCTTG ATCCGGAAAA TGTAAAAGCA GTTGTGGAAA AGTATCAGCC TGATGCGATC ATCCATACGG CAGCAATGAC CAATGTGGAT ACTTGTGAAG CAGAAAAGGA GCTTGCTTAC CAGTTAAATG TAGAAGCCGT TAAAACCCTG GTATCGCTGT GCGAACTGCA CAATATCCAA CTGGTACACT TGTCTACCGA CTTTATATTT GATGGTGCCC ATGGCCCCTA TGATGAACTG GCCGCACCCA ATCCTTTAAG TTATTACGGG ATTACCAAGC TGGAAGCAGA AGAAGTGATC AAAAGTTCTA CCTGCCGCTG GGCCATTCTC CGTACCATTA TAGTATATGG TATTGTGAGC GACATGAGCA GGACCAATAT TGTGCTTTGG GCAAAAACTG CGCTGGAAAA AGGAAGCCCG ATCAATGTGG TAAACGACCA GTGGCGGATG CCTACCTTGG CAGAAGACCT GGCAGATTGC TGCCTGCTGG CAGTAGAGAA AGATGCCCGT GGTGTGTATA ATGCTTCAGG GAAAGATATG ATGCGTATTT CTGAACTGGT AGCCCGGGTG GCTGATTATT GGGGGCTCAA TAAAAGCCTG ATTACTGAAA TCAGTTCTGA AAGTTTAAAC CAGGCAGCTA AAAGACCTGT TAAAACTGGT TTTATATTAG ATAAGACCAT CAACGATCTT GGCTATAGCC CACATAGTTT TGAAGAAGGC CTGGCAATAG TTGACCATCA GTTGGGCCTT CGCCTCACAT AG
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Protein sequence | MRTVLVTGSN GLLGQKITER LLVTNQFGLI ATAKGGNRFP VTEGYTYAEM DILDPENVKA VVEKYQPDAI IHTAAMTNVD TCEAEKELAY QLNVEAVKTL VSLCELHNIQ LVHLSTDFIF DGAHGPYDEL AAPNPLSYYG ITKLEAEEVI KSSTCRWAIL RTIIVYGIVS DMSRTNIVLW AKTALEKGSP INVVNDQWRM PTLAEDLADC CLLAVEKDAR GVYNASGKDM MRISELVARV ADYWGLNKSL ITEISSESLN QAAKRPVKTG FILDKTINDL GYSPHSFEEG LAIVDHQLGL RLT
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