Gene Phep_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3389 
Symbol 
ID8254508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4029768 
End bp4030349 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content39% 
IMG OID644937041 
ProductYceI family protein 
Protein accessionYP_003093645 
Protein GI255533273 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.013479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TATTCGTTTT GCTTGCAGTA TTGAGTACTG CCCTTTTTGC TTTCAAAGCT 
GTTGCACCAT CAACCTGGAC GGCTGATCCG GCGCATTCTA AATTAGGCTT TGTGATTACC
CACCTACTGA TTACTGATGT AGAGGGATCT TTTAAAAACT TCGAATCAAC CATCACTTCT
TCAAAACCCG ACTTTTCTGA TGCAGTAATT GAATTGAGTG CGGATGTAAA TTCGGTAAAT
ACCGATAACG ACAAAAGAGA TGAGCACTTG AGAAGTGCCG ATTTTTTTGA TGCAGCTAAA
TTTCCTAAGC TGACCTTCAA AAGCACATCC GTAAAAAAAG TTGCCGGAAA CAAATATAAA
GTAAACGGGA ACCTGACATT TCACGGGGTA ACCAAACCGA TTACTTTAGA TGCGGTTTTA
AGAGGGGTAA CCACCAATCC AATGTCTAAA AAACCTACTG CAGGATTTAA AGTTAGCGGA
ACAATTAAAA GAAGCGATTT TGGATTTGGT GCCAAATTCG GTAATGCTAT GCTTAGCGAC
GAGGTAACCT TAAACGCAAA TACAGAATTT GTACAAAATT AA
 
Protein sequence
MKKIFVLLAV LSTALFAFKA VAPSTWTADP AHSKLGFVIT HLLITDVEGS FKNFESTITS 
SKPDFSDAVI ELSADVNSVN TDNDKRDEHL RSADFFDAAK FPKLTFKSTS VKKVAGNKYK
VNGNLTFHGV TKPITLDAVL RGVTTNPMSK KPTAGFKVSG TIKRSDFGFG AKFGNAMLSD
EVTLNANTEF VQN