Gene Phep_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3388 
Symbol 
ID8254507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4029273 
End bp4029689 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content42% 
IMG OID644937040 
Producthypothetical protein 
Protein accessionYP_003093644 
Protein GI255533272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000862126 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAT ATGTTTTAAT CCTGTTTTGC GCTGCAATGC TTGTGGCCTG CGATAAAAAA 
GAGCCATCAG ATTGTGGGAG ATTGATCTGT ACCCAGGAAT TCCGGATGAT CCTTTTTAAT
TTTACCGACA AAGATGGGAG AGGTGTTCCC GTTAAAAATT ACAGTGCCAT AAACCAGCGT
ACGGGCGAGG TCATTAAAAC AACCGGTGGT GCAACTATCG ATTTAAGCAC GGGTACCTTT
ATTGTTATTG ACGATTCTTC TTTAAAACAA CTGTCTGCTG AAGGCGATGA CATCAAGGTT
ACAGCTACTT ATGAGGCAAC GGGACAAACC AAATCGGCCA TCTTAAAAGT TTCAGGCGGA
AAATGTGCCT GCCACATCCA AAAAATTTCA GGCCCTGAAA CTATCGCTTT TGATTAA
 
Protein sequence
MYKYVLILFC AAMLVACDKK EPSDCGRLIC TQEFRMILFN FTDKDGRGVP VKNYSAINQR 
TGEVIKTTGG ATIDLSTGTF IVIDDSSLKQ LSAEGDDIKV TATYEATGQT KSAILKVSGG
KCACHIQKIS GPETIAFD