Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3388 |
Symbol | |
ID | 8254507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4029273 |
End bp | 4029689 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937040 |
Product | hypothetical protein |
Protein accession | YP_003093644 |
Protein GI | 255533272 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000862126 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATAAAT ATGTTTTAAT CCTGTTTTGC GCTGCAATGC TTGTGGCCTG CGATAAAAAA GAGCCATCAG ATTGTGGGAG ATTGATCTGT ACCCAGGAAT TCCGGATGAT CCTTTTTAAT TTTACCGACA AAGATGGGAG AGGTGTTCCC GTTAAAAATT ACAGTGCCAT AAACCAGCGT ACGGGCGAGG TCATTAAAAC AACCGGTGGT GCAACTATCG ATTTAAGCAC GGGTACCTTT ATTGTTATTG ACGATTCTTC TTTAAAACAA CTGTCTGCTG AAGGCGATGA CATCAAGGTT ACAGCTACTT ATGAGGCAAC GGGACAAACC AAATCGGCCA TCTTAAAAGT TTCAGGCGGA AAATGTGCCT GCCACATCCA AAAAATTTCA GGCCCTGAAA CTATCGCTTT TGATTAA
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Protein sequence | MYKYVLILFC AAMLVACDKK EPSDCGRLIC TQEFRMILFN FTDKDGRGVP VKNYSAINQR TGEVIKTTGG ATIDLSTGTF IVIDDSSLKQ LSAEGDDIKV TATYEATGQT KSAILKVSGG KCACHIQKIS GPETIAFD
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