Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3330 |
Symbol | murE |
ID | 8254449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3950863 |
End bp | 3952320 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644936982 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_003093586 |
Protein GI | 255533214 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.972374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCTGC AGGATATTTT ATATGGTGTA ACTATAACTG ACCAGATTGG TGTAACCAAC AGGAAGGTAA GTGCTTTGGT ATTTGATTCC CGACAGGTTA TAAAAGATGC TGCATTTTTT GCCATAAAGG GTACATTAGC TGATGGACAT ACCTATATTG CTGCTACAGT TAGCGCAGGT GCCGGGGTAG TTATTTGCGA GGTATTACCA GCTGAAATTG CTCCTGATGT TACCTATATC CAGGTAGCGA ACAGTGCTGT AGCATTGGGT AGGATGGCTG CTAATTTTTA TGGAAACCCT TCTGAAAAAC TGCAGCTGAC TGGCATTACA GGTACAAATG GTAAAACAAC TATTGCCACA TTGCTTTTTA AACTTTTCAG GGCATTGGGC TATAAAGTTG GTCTGATCTC AACTGTTGAA AACCACATCA ATGATGAGGT TATTCCTGCA ACACATACTA CACCTGATCC GCTGGCTTTA AATGCGCTTT TACAGGATAT GGTGGATGCA GGTTGTGATT ATTGTTTTAT GGAAGTGAGT TCCCATGCTG TCGTTCAACA TAGAATAGAA GGTTTGAGCT TTGCTGGTGG GGTATTTTCT AACATCACCC ATGATCATCT GGATTTTCAC AAAACCTTTG ATCAGTATAT AAAAGCCAAG AAAGCATTTT TTGATGCCTT GCCGGCATCG GCTTTTGCAC TGACCAATCT GGACGATAAG AATGGTATGG TCATGCTGCA GAATACAAGA GCTGCTAAAA AGACCTATGC CCTGAAGCAG CTTGCTGATT TTAAGGCCAA GGTGATCGAG AATAGTTTTA AAGGTTTGCA CCTGGATATA GATGATGCAG ATGTTTTCTT TAAACTGGTA GGATCTTTTA ACGCCTATAA CTTATTGGCT GTTTATGGTA CAGCGGTATT GCTTGGTCAG GAGAAGCTGG ATGTGCTGAC TTTATTGAGT AATTTAACCG GGGCAGAAGG CCGTTTTGAT TACATTACTT CCAGTCAGCA TATTATTGGA ATAGTTGATT ATGCACATAC GCCTGATGCA GTTCAGAATG TGCTGAGTAC AATACAGGAT ATCAGAAAAG GAACGGAGCA GGTAATTACC ATTATAGGTT GTGGTGGTGA CAGGGATAAG ACCAAGCGTC CCATTATGGC CCAGGTAGCC TGCGACTGGA GTGATAAGGT GATCCTCACT TCTGACAATC CAAGAACGGA AAACCCGCAA ACGATAGTGG AGGAAATGGA AAAAGGTGTT TCGCCAACAA ACAAGCGTAA AACTTTAAGC ATAGTAGACA GAAAAGAGGC GATTAAAACA GCATGTCATT TGGCCAGACC AGGTGATATT ATATTGCTGG CAGGAAAAGG ACATGAGAAA TACCAGGAAA TAAATGGGGT GAGGTATCAT TTTGATGATA AGGAAATATT AACCGAACAA CTAAACTTAA TCAGCTAA
|
Protein sequence | MQLQDILYGV TITDQIGVTN RKVSALVFDS RQVIKDAAFF AIKGTLADGH TYIAATVSAG AGVVICEVLP AEIAPDVTYI QVANSAVALG RMAANFYGNP SEKLQLTGIT GTNGKTTIAT LLFKLFRALG YKVGLISTVE NHINDEVIPA THTTPDPLAL NALLQDMVDA GCDYCFMEVS SHAVVQHRIE GLSFAGGVFS NITHDHLDFH KTFDQYIKAK KAFFDALPAS AFALTNLDDK NGMVMLQNTR AAKKTYALKQ LADFKAKVIE NSFKGLHLDI DDADVFFKLV GSFNAYNLLA VYGTAVLLGQ EKLDVLTLLS NLTGAEGRFD YITSSQHIIG IVDYAHTPDA VQNVLSTIQD IRKGTEQVIT IIGCGGDRDK TKRPIMAQVA CDWSDKVILT SDNPRTENPQ TIVEEMEKGV SPTNKRKTLS IVDRKEAIKT ACHLARPGDI ILLAGKGHEK YQEINGVRYH FDDKEILTEQ LNLIS
|
| |