Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3325 |
Symbol | murC |
ID | 8254444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3944622 |
End bp | 3945977 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644936977 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_003093581 |
Protein GI | 255533209 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.148113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.545808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGA ATCATATACA GCGCGTTTAT TTTGTGGGAA TTGGTGGGAT TGGCATGAGT GCCATTGCCA GGTATTTTGC AAAAAGAGGG TGTGTAGTTT GTGGTTACGA CAAAACACGT ACAAATTTGA CTGTTGCTTT GGAACAGGAA GGCATTTTGG TGTCTTATCT TGATGATGCT GCTGTATTGC CTGTGTGCTT TTTAGCAAAT AACAGCGATA CACTGATTGT TTATACACCA GCAATACCAA AGAATTCCGA AATATTAAAT TACTTTAAAG ACAATGGTTT TATTTTAAAG AAGCGTTCTG AGGTTTTAGG CATCATCAGT AAAGGACAGT TTTGTATAGC TGTGGCAGGT ACACATGGAA AAACCACTAC TTCATCTATT GTAGCCCATG TTTTAATAGA TAGCGGATAT GGATGTACAG CTTTTTTGGG TGGGATTGCC AGTAATTATA ACAGCAATTT TATTATTGGA AACAATAACG TCGTTGTAGT TGAGGCCGAT GAATACGACC GTTCTTTCCT GACACTTCAC CCTGATCTGG CTGTGATTAC TTCAATGGAT GCAGATCACC TGGATATTTA TGGCGATGCT GCTCATCTGC ATGAATCTTT TGGTCTGTTT GCAAAGCAGT TAAAGCCACA GGGCACATTG TTTGTGCGTA AGGGGCTTCC TTTGACAGCC GGGCTCAGTT ACAGTGTTGG ACAGGATTCA CAGATTAAGG GACAAAACAT CAGGGTAGAA GGTTCGAAGT TTGTGTTTGA TTATGTTGAT ACTGATCTGA GGATCAGCGA TATACAACTC ATGCTGCCAG GCAAACATAA TGTTGAGAAT GCAGTAGCCG CAATTGCTGT AGCGCTTAAA CTGGGTATTG ACCACCATAA GATAAAAGCG GCAATAGCTT CTTTTACAGG GGTTAAAAGA AGATTCGAAT ACATAGTGAA TACGCCGGAT CACATTTATA TTGATGATTA TGCCCATCAT CCAGAAGAAT TAAGGGCTTG CTTTGATGCG GTACGACAAT TGTATCCTGA TAAAAAGTTA ACGGTCATCT TTCAGCCGCA TCTTTTTACA CGCACACGCG ACTTTGCAGC TGAATTTGCA AAAGTTTTAA GCACTGTAGA TGAACTGCTG CTACTGGAAA TATATCCGGC CAGGGAATTG CCTTTACCAG GCATAAATTC GCAGTTTTTG CTGGATAAGA TGTCCTTGAA AAGCAAGAGG ATATGTGGAA AAGATTTAGT AATAGAAGAG ATAAAAAATA CAAAACCTGA ATTACTTTTA ACAGTAGGTG CAGGAGATAT AGACACATTG ATACAACCAC TTAAAGCCAT TTTGAGAGAT GTTTAA
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Protein sequence | MELNHIQRVY FVGIGGIGMS AIARYFAKRG CVVCGYDKTR TNLTVALEQE GILVSYLDDA AVLPVCFLAN NSDTLIVYTP AIPKNSEILN YFKDNGFILK KRSEVLGIIS KGQFCIAVAG THGKTTTSSI VAHVLIDSGY GCTAFLGGIA SNYNSNFIIG NNNVVVVEAD EYDRSFLTLH PDLAVITSMD ADHLDIYGDA AHLHESFGLF AKQLKPQGTL FVRKGLPLTA GLSYSVGQDS QIKGQNIRVE GSKFVFDYVD TDLRISDIQL MLPGKHNVEN AVAAIAVALK LGIDHHKIKA AIASFTGVKR RFEYIVNTPD HIYIDDYAHH PEELRACFDA VRQLYPDKKL TVIFQPHLFT RTRDFAAEFA KVLSTVDELL LLEIYPAREL PLPGINSQFL LDKMSLKSKR ICGKDLVIEE IKNTKPELLL TVGAGDIDTL IQPLKAILRD V
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