Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3278 |
Symbol | |
ID | 8254397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3890391 |
End bp | 3891722 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644936931 |
Product | anaerobic c4-dicarboxylate antiporter, Dcu family |
Protein accession | YP_003093535 |
Protein GI | 255533163 |
COG category | [R] General function prediction only |
COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.737723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTGGA TACAGCTTGC AGTTTTAATT CTGCTGATAT TGGTGGGTGC ACGTATGAAA GGAATAGGTC TGGGTGTAAT GGGGGCTGTA GGGCTGCTGA TATTTGCACT TGGATTTGGC CTTAAGCCAA CTACCCCGCC AATAGATGTG ATGCTGATCA TTTTGTCGGT TGTTACCGCA GCAGCGGCCT TGCAGGCCGC AGGGGGTATG GACTATATGG TAAGCATTGC CGAGAAGATC CTGCGCAGAA ATCCCAACCA CATTACCTGG CTGGGCCCCT TGGTTACCTA TTCTTTTACC CTTGTTGCAG GTACTGCGCA CATCATTTAC TCCTTGCTGC CCATCATTGC AGAAGTTGCT ACTAAAAAGA GGGTAAGGCC AGAGCGCCCA CTTAGTATTT CTGTTATTGC TGCCCATCTG GCCATTACCG CCAGTCCCAT TTCTGCTGCA ACAGTTGCTT TAACTTCCTT AATTGCGCCC AAAGGTTACG AACTAACAGA CATTCTTATC GTAGCCATTC CCGCAACCAT CATTGGTGTA CTGGCCGGGG CACTGGTAGC CAGCCGTCAG GGAAAAGAGC TGATGAAAGA CCCTGAATTC CTGGAAAGAT TAAAAGACCC TGAATTTGTG AGACTACTGG ATGGCGATCC TGCTGATCAC ACAAAGGAAA AAATTTTCAG CACTGCTGCT AAAAGATCAG TCTATGTTTT TCTCCTGGCG GTAATTAGTG TCGTATTGTT TGCTGCAATT CCTTCACTTC GTCCCTCTTT CCTTACAGAT GGTAAAATGC AACCCCTGCG TATGGTCGAA ATGATAGAAC TGCTTATGCT TACTGCGGCG GCTGCCATTA TTCTGGTGAC CAAAACTCCG GCTGCCAAAG TATCCCAATC TACAATTTTC CGTTCCGGAG GCGAAGCCGT AGTGTGTATA TTTGGTGTAG CCTGGATGAG CGATACCTAT TTGCAAGCCC ATATGCCCTT TTTTGAAAGC CATCTAAGCG ATTTTGTAAC TGTTCATCCA TGGACATTTG CCATTGCACT CTTTGTCATG TCCATCCTTT TGTTCAGTCA GGCTGCTACT GTAAGGGCAC TCATGCCACT GGGCATCTCT CTTGGTATTC CAGCTCCGGC CCTTATTGCC ATGTTTCCGG CCGTTAATGG CGACTTTGTG ATCCCAAGCT ATCCTACACT GGTAGCAGCA ATGGGCTTCG ACAGAACCGG CACTACAAAG ATAGGCCGTT TTCTGATTAA CCATTCTTTT ACCCCACCAG GCTTAACAGC AGTTATTGTA ACCATTGCAA CCGGCTTTCT CCTTGCTGCT GTTCTGTTGT AA
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Protein sequence | MVWIQLAVLI LLILVGARMK GIGLGVMGAV GLLIFALGFG LKPTTPPIDV MLIILSVVTA AAALQAAGGM DYMVSIAEKI LRRNPNHITW LGPLVTYSFT LVAGTAHIIY SLLPIIAEVA TKKRVRPERP LSISVIAAHL AITASPISAA TVALTSLIAP KGYELTDILI VAIPATIIGV LAGALVASRQ GKELMKDPEF LERLKDPEFV RLLDGDPADH TKEKIFSTAA KRSVYVFLLA VISVVLFAAI PSLRPSFLTD GKMQPLRMVE MIELLMLTAA AAIILVTKTP AAKVSQSTIF RSGGEAVVCI FGVAWMSDTY LQAHMPFFES HLSDFVTVHP WTFAIALFVM SILLFSQAAT VRALMPLGIS LGIPAPALIA MFPAVNGDFV IPSYPTLVAA MGFDRTGTTK IGRFLINHSF TPPGLTAVIV TIATGFLLAA VLL
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