| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3237 |
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| Symbol | |
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| ID | 8254356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3843851 |
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| End bp | 3844579 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936890 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_003093494 |
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| Protein GI | 255533122 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03518] gliding motility-associated ABC transporter permease protein GldF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0727284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACGCAG TTTTTAAACG GGAATTGTTC AGCTTGCTGA ATTCGCTGAT GGCTTATATT
ACGATTGGTA TTTTTTTGCT GGTCTCGGGT TTACTGCTTT GGTTCTTTCC TGATACCTCT
GTACTGGAAT ATGGCTATGC AGAGCTGACC GGTTTTTTTA GCCTGGCACC TTTCTTATTT
ATGTTCTTAA TTCCTGCGGT TACCATGCGC TCCTTTGCCG AAGAAAGAAG GGAAGGTACT
TATGTTTTGC TGGCTACCAG GCCCGTAACC GACTGGCAAA TTGTGCTTGC CAAGTATTTT
GCCTGCCTGA TATTGCTGTT GTTTGCCCTT ATTCCTACAC TAATCTATTA TTTTACAGTA
TCGCAATTGG CCTTGCCCAA AGGAAACATC GATGCCGGGG CAGTCATTGG TTCGTACATT
GGTTTATTGC TGCTGGGGGC TGCATTTACA GGGATTGGTA TTTTTGCTTC TTCCATTACC
AAAAATCAGG TGATCGCTTT TGCTGTAGCT GCATTTTTGT GTTTTATAGC CTATATTGGT
TTTGATGCCC TAAGCCAGTT GTTTAGCCTG AGTTATTTTG AAAATGTATT TCAGTCATTG
AGTGTAAATG AACATTATCA GTCCATAAGC AGGGGGGTGC TGGATACCCG GGACCTGGTA
TACTTTATCA GTTTTATACT TGTGTTTTTA GGGGCGGCAA GGTTAGTGAT AGGAGGGCGG
AAATGGTAA
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| Protein sequence | MYAVFKRELF SLLNSLMAYI TIGIFLLVSG LLLWFFPDTS VLEYGYAELT GFFSLAPFLF
MFLIPAVTMR SFAEERREGT YVLLATRPVT DWQIVLAKYF ACLILLLFAL IPTLIYYFTV
SQLALPKGNI DAGAVIGSYI GLLLLGAAFT GIGIFASSIT KNQVIAFAVA AFLCFIAYIG
FDALSQLFSL SYFENVFQSL SVNEHYQSIS RGVLDTRDLV YFISFILVFL GAARLVIGGR
KW
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