Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3192 |
Symbol | |
ID | 8254311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3798431 |
End bp | 3799723 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644936845 |
Product | histidinol dehydrogenase |
Protein accession | YP_003093449 |
Protein GI | 255533077 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0141] Histidinol dehydrogenase |
TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.405899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCT ACAGTTATAA AGATTTAACT AAACAAGAAG TTGAAGAAAT CTGTTTGCGA CAACTGGAAG ACGATGTAAA CATACAGGAA AGGGTAAAAT CCATCGTGGA AAGGGTAAAG ATGGAGGGCG ATAAGGCCTT GTTTGATTAT GCACTTTCTT TTGACCAGAT CCGGCTTGAA GAGCTTTTTA TTGATCAGCA GGAGATCATG ACCATTGCGG CTACTATTCC TGCTGAGGCT AAAGCTGCCA TTGATACCGC TTACCAAAAC ATCAAAACCT TCCACGCTTC ACAACTGCTG CAGGAAGATA AAGTAGAAAC CATGCCCGGC GTAACCTGCT GGCGCGAAAC CAGGGCTATT GAACGGGTTG GCCTGTATAT CCCTGGTGGA ACTGCAGTTT TACCAAGTAC TTTCCTGATG CTGGGTATCC CGGCAGTACT GGCAGGCTGT AAAGAAATCG TGGTTTGTTC TCCACCTCAG AAAGATGGCA AAACCAATTG TTACCTGGCC TATGTAGCCA CGTTACTGGG TATAGAAAGG ATTTACCTGG TGGGTGGGGC GCAGGCTGTA GCGGCAATGG CTTACGGAAC AGCAAGCGTG CCCAAGGTAG ACAAGGTATT TGGACCCGGC AACAGGTATG TGACCCAGGC CAAGCAACTG ATACAGGGAA ATACCATGAC TGCAATAGAC ATGCCTGCAG GCCCATCGGA GGTTTTGGTG CTTGCTGATG AGACTGCCAT TCCGTCATAC ATTGCTTCTG ATCTTTTAGC TCAGGCAGAA CACGGCATTG ATTCTCAGAC TATTTTGGTT GCCACCTCAA GTAAAATCAT AGATGAAACA ATGGAGCAAC TGGCGCTGCA ACTGCAAGTA CTTCCCAGGG CAGCGTTTGC GACAAAAGCC ATCGAAAACT CCTATTCCGT GCTGGTGAAT GACCTGGAAG AGGGCATGAA ATTCAGTAAT GTATATGCAC CGGAACACCT TATCCTTGCT ACCGATAACT GTGAGCGGCT GATCCCGCTG ATCAGCAATG CCGGATCAGT ATTTTTAGGA AATTTAACGC CTGAAAGTGC CGGGGATTAC GCTTCGGGAA CCAACCATAC CCTGCCTACC AGTGGTTATG CCAGGGCCTA TTCGGGGGTA TCGATGGATT CATTTATGAA GAAGATCACT TTCCAGCACA TTACGACGCA GGGTTTGCGG CATATAGGAA ATACCGTTGA AGTACTTGCT GCTGCTGAGG GGCTGGATGC CCACAAAAAT GCAGTGAGCA TTCGTTTAAA ATCATTAGAT TAA
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Protein sequence | MKIYSYKDLT KQEVEEICLR QLEDDVNIQE RVKSIVERVK MEGDKALFDY ALSFDQIRLE ELFIDQQEIM TIAATIPAEA KAAIDTAYQN IKTFHASQLL QEDKVETMPG VTCWRETRAI ERVGLYIPGG TAVLPSTFLM LGIPAVLAGC KEIVVCSPPQ KDGKTNCYLA YVATLLGIER IYLVGGAQAV AAMAYGTASV PKVDKVFGPG NRYVTQAKQL IQGNTMTAID MPAGPSEVLV LADETAIPSY IASDLLAQAE HGIDSQTILV ATSSKIIDET MEQLALQLQV LPRAAFATKA IENSYSVLVN DLEEGMKFSN VYAPEHLILA TDNCERLIPL ISNAGSVFLG NLTPESAGDY ASGTNHTLPT SGYARAYSGV SMDSFMKKIT FQHITTQGLR HIGNTVEVLA AAEGLDAHKN AVSIRLKSLD
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